Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptch2O35595 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptch2O35595 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptch2O35595 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ptch2O35595 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptch2O35595 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ptch2O35595 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptch2O35595 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptch2O35595 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ptch2O35595 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ptch2O35595 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.54□□□□□ -0.4
Ptch2O35595 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ptch2O35595 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ptch2O35595 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ptch2O35595 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.54□□□□□ -0.4
Ptch2O35595 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.54□□□□□ -0.4
Ptch2O35595 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.54□□□□□ -0.4
Ptch2O35595 Gm45770-201ENSMUST00000212105 616 ntBASIC12.54□□□□□ -0.4
Ptch2O35595 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.54□□□□□ -0.4
Ptch2O35595 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.54□□□□□ -0.4
Ptch2O35595 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.54□□□□□ -0.4
Ptch2O35595 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.54□□□□□ -0.4
Ptch2O35595 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.54□□□□□ -0.4
Ptch2O35595 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ptch2O35595 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.54□□□□□ -0.4
Ptch2O35595 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ptch2O35595 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.53□□□□□ -0.4
Ptch2O35595 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.53□□□□□ -0.4
Ptch2O35595 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Ptch2O35595 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ptch2O35595 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ptch2O35595 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 Gm13045-201ENSMUST00000119019 712 ntBASIC12.53□□□□□ -0.4
Ptch2O35595 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.53□□□□□ -0.4
Ptch2O35595 Gm11434-201ENSMUST00000122379 629 ntBASIC12.53□□□□□ -0.4
Ptch2O35595 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.53□□□□□ -0.4
Ptch2O35595 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.53□□□□□ -0.4
Ptch2O35595 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.53□□□□□ -0.4
Ptch2O35595 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.53□□□□□ -0.4
Ptch2O35595 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ptch2O35595 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.53□□□□□ -0.4
Ptch2O35595 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.53□□□□□ -0.4
Ptch2O35595 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Ptch2O35595 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ptch2O35595 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ptch2O35595 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ptch2O35595 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ptch2O35595 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ptch2O35595 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms