Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.03□□□□□ -0.48
Slc1a6O35544 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc1a6O35544 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Slc1a6O35544 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc1a6O35544 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc1a6O35544 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Slc1a6O35544 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Slc1a6O35544 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Slc1a6O35544 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc1a6O35544 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Slc1a6O35544 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.02□□□□□ -0.48
Slc1a6O35544 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Slc1a6O35544 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Slc1a6O35544 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Slc1a6O35544 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Slc1a6O35544 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Slc1a6O35544 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Slc1a6O35544 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Slc1a6O35544 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Slc1a6O35544 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Slc1a6O35544 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Slc1a6O35544 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Slc1a6O35544 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Slc1a6O35544 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.02□□□□□ -0.48
Slc1a6O35544 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Slc1a6O35544 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc1a6O35544 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.02□□□□□ -0.49
Slc1a6O35544 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Slc1a6O35544 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Slc1a6O35544 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Slc1a6O35544 Mir1894-201ENSMUST00000122802 81 ntBASIC12.02□□□□□ -0.49
Slc1a6O35544 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.02□□□□□ -0.49
Slc1a6O35544 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.02□□□□□ -0.49
Slc1a6O35544 Gm22331-201ENSMUST00000158066 136 ntBASIC12.02□□□□□ -0.49
Slc1a6O35544 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc1a6O35544 Gm29705-201ENSMUST00000212598 474 ntBASIC12.02□□□□□ -0.49
Slc1a6O35544 Gm17794-201ENSMUST00000220252 955 ntBASIC12.02□□□□□ -0.49
Slc1a6O35544 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.02□□□□□ -0.49
Slc1a6O35544 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc1a6O35544 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.02□□□□□ -0.49
Slc1a6O35544 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc1a6O35544 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.02□□□□□ -0.49
Slc1a6O35544 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc1a6O35544 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc1a6O35544 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.02□□□□□ -0.49
Slc1a6O35544 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Slc1a6O35544 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc1a6O35544 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc1a6O35544 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc1a6O35544 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc1a6O35544 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc1a6O35544 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc1a6O35544 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc1a6O35544 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.01□□□□□ -0.49
Slc1a6O35544 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Slc1a6O35544 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.01□□□□□ -0.49
Slc1a6O35544 Gm11814-201ENSMUST00000119515 929 ntBASIC12.01□□□□□ -0.49
Slc1a6O35544 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Gm6244-201ENSMUST00000178732 841 ntBASIC12.01□□□□□ -0.49
Slc1a6O35544 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Slc1a6O35544 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.01□□□□□ -0.49
Slc1a6O35544 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Slc1a6O35544 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.01□□□□□ -0.49
Slc1a6O35544 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Slc1a6O35544 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc1a6O35544 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc1a6O35544 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Slc1a6O35544 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc1a6O35544 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Slc1a6O35544 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12□□□□□ -0.49
Slc1a6O35544 Gm29100-201ENSMUST00000187564 4410 ntBASIC12□□□□□ -0.49
Slc1a6O35544 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms