Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm14644-201ENSMUST00000116671 647 ntBASIC12.73□□□□□ -0.37
Ebf3O08791 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.73□□□□□ -0.37
Ebf3O08791 Gm13611-201ENSMUST00000118269 318 ntBASIC12.73□□□□□ -0.37
Ebf3O08791 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.73□□□□□ -0.37
Ebf3O08791 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.73□□□□□ -0.37
Ebf3O08791 Gm45118-201ENSMUST00000208928 825 ntBASIC12.73□□□□□ -0.37
Ebf3O08791 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.73□□□□□ -0.37
Ebf3O08791 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.73□□□□□ -0.37
Ebf3O08791 Gm29787-201ENSMUST00000222129 849 ntBASIC12.73□□□□□ -0.37
Ebf3O08791 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ebf3O08791 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ebf3O08791 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ebf3O08791 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.73□□□□□ -0.37
Ebf3O08791 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Ebf3O08791 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ebf3O08791 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf3O08791 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf3O08791 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf3O08791 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf3O08791 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.72□□□□□ -0.37
Ebf3O08791 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ebf3O08791 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf3O08791 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf3O08791 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf3O08791 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ebf3O08791 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Ebf3O08791 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.72□□□□□ -0.37
Ebf3O08791 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.72□□□□□ -0.37
Ebf3O08791 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ebf3O08791 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.72□□□□□ -0.37
Ebf3O08791 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf3O08791 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.72□□□□□ -0.37
Ebf3O08791 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.72□□□□□ -0.37
Ebf3O08791 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.72□□□□□ -0.37
Ebf3O08791 Rmrp-201ENSMUST00000157463 271 ntBASIC12.72□□□□□ -0.37
Ebf3O08791 Gm27627-201ENSMUST00000183644 150 ntBASIC12.72□□□□□ -0.37
Ebf3O08791 Gm42937-201ENSMUST00000197360 752 ntBASIC12.72□□□□□ -0.37
Ebf3O08791 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.72□□□□□ -0.37
Ebf3O08791 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.72□□□□□ -0.37
Ebf3O08791 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.72□□□□□ -0.37
Ebf3O08791 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf3O08791 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf3O08791 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf3O08791 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.72□□□□□ -0.37
Ebf3O08791 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf3O08791 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ebf3O08791 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf3O08791 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.72□□□□□ -0.37
Ebf3O08791 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.72□□□□□ -0.37
Ebf3O08791 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf3O08791 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.72□□□□□ -0.37
Ebf3O08791 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf3O08791 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf3O08791 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf3O08791 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf3O08791 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf3O08791 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf3O08791 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf3O08791 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf3O08791 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf3O08791 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.71□□□□□ -0.37
Ebf3O08791 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf3O08791 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf3O08791 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ebf3O08791 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf3O08791 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf3O08791 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Ebf3O08791 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf3O08791 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf3O08791 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf3O08791 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ebf3O08791 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ebf3O08791 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.71□□□□□ -0.37
Ebf3O08791 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Ebf3O08791 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.71□□□□□ -0.37
Ebf3O08791 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.71□□□□□ -0.37
Ebf3O08791 Gm23699-201ENSMUST00000158835 135 ntBASIC12.71□□□□□ -0.37
Ebf3O08791 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.71□□□□□ -0.37
Ebf3O08791 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms