Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AlyrefO08583 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
AlyrefO08583 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AlyrefO08583 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
AlyrefO08583 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.46□□□□□ -0.41
AlyrefO08583 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.46□□□□□ -0.41
AlyrefO08583 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.46□□□□□ -0.41
AlyrefO08583 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
AlyrefO08583 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.46□□□□□ -0.41
AlyrefO08583 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
AlyrefO08583 Gm20614-201ENSMUST00000177106 632 ntBASIC12.46□□□□□ -0.41
AlyrefO08583 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
AlyrefO08583 Gm9507-202ENSMUST00000180157 654 ntBASIC12.46□□□□□ -0.41
AlyrefO08583 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.46□□□□□ -0.41
AlyrefO08583 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
AlyrefO08583 Gm5870-201ENSMUST00000196461 282 ntBASIC12.46□□□□□ -0.41
AlyrefO08583 Gm19187-201ENSMUST00000206781 892 ntBASIC12.46□□□□□ -0.41
AlyrefO08583 Gm18460-201ENSMUST00000208088 464 ntBASIC12.46□□□□□ -0.41
AlyrefO08583 Gm2875-201ENSMUST00000211333 360 ntBASIC12.46□□□□□ -0.41
AlyrefO08583 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.46□□□□□ -0.41
AlyrefO08583 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.46□□□□□ -0.41
AlyrefO08583 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.46□□□□□ -0.41
AlyrefO08583 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
AlyrefO08583 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AlyrefO08583 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AlyrefO08583 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
AlyrefO08583 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AlyrefO08583 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
AlyrefO08583 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
AlyrefO08583 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
AlyrefO08583 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
AlyrefO08583 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
AlyrefO08583 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.46□□□□□ -0.42
AlyrefO08583 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
AlyrefO08583 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC12.45□□□□□ -0.42
AlyrefO08583 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
AlyrefO08583 Gm23255-201ENSMUST00000102244 110 ntBASIC12.45□□□□□ -0.42
AlyrefO08583 Gm24791-201ENSMUST00000104284 131 ntBASIC12.45□□□□□ -0.42
AlyrefO08583 Gm11956-201ENSMUST00000119525 512 ntBASIC12.45□□□□□ -0.42
AlyrefO08583 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.45□□□□□ -0.42
AlyrefO08583 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.45□□□□□ -0.42
AlyrefO08583 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
AlyrefO08583 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Gm9645-201ENSMUST00000197131 792 ntBASIC12.45□□□□□ -0.42
AlyrefO08583 Gm29763-201ENSMUST00000205306 616 ntBASIC12.45□□□□□ -0.42
AlyrefO08583 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.45□□□□□ -0.42
AlyrefO08583 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.45□□□□□ -0.42
AlyrefO08583 Gm3619-201ENSMUST00000219947 775 ntBASIC12.45□□□□□ -0.42
AlyrefO08583 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.45□□□□□ -0.42
AlyrefO08583 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
AlyrefO08583 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
AlyrefO08583 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
AlyrefO08583 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
AlyrefO08583 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AlyrefO08583 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
AlyrefO08583 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.44□□□□□ -0.42
AlyrefO08583 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
AlyrefO08583 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
AlyrefO08583 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
AlyrefO08583 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.44□□□□□ -0.42
AlyrefO08583 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.44□□□□□ -0.42
AlyrefO08583 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AlyrefO08583 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms