Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Gm38089-201ENSMUST00000193585 1514 ntBASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Gm21358-201ENSMUST00000191645 1659 ntBASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Gm11244-201ENSMUST00000121243 237 ntBASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Gm11675-201ENSMUST00000121873 832 ntBASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Gm20495-201ENSMUST00000173902 235 ntBASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Gm18642-201ENSMUST00000206642 1400 ntBASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC18.19■□□□□ 0.5
Pcf11G3X9Z4 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Gm37028-201ENSMUST00000194276 107 ntBASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Gm3619-201ENSMUST00000219947 775 ntBASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 AC164702.1-201ENSMUST00000220135 2212 ntBASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Gm8522-201ENSMUST00000118416 1929 ntBASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcf11G3X9Z4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Gm9089-201ENSMUST00000122027 526 ntBASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Gm25072-201ENSMUST00000175233 235 ntBASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC18.17■□□□□ 0.5
Pcf11G3X9Z4 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms