Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.72□□□□□ -0.05
NpcdF8VQB8 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Gm11949-201ENSMUST00000117640 372 ntBASIC14.72□□□□□ -0.05
NpcdF8VQB8 Gm7541-201ENSMUST00000118361 535 ntBASIC14.72□□□□□ -0.05
NpcdF8VQB8 Gm15595-201ENSMUST00000120840 961 ntBASIC14.72□□□□□ -0.05
NpcdF8VQB8 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NpcdF8VQB8 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Gm18304-201ENSMUST00000189162 546 ntBASIC14.72□□□□□ -0.05
NpcdF8VQB8 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.72□□□□□ -0.05
NpcdF8VQB8 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NpcdF8VQB8 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.72□□□□□ -0.05
NpcdF8VQB8 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NpcdF8VQB8 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
NpcdF8VQB8 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NpcdF8VQB8 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.71□□□□□ -0.05
NpcdF8VQB8 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.71□□□□□ -0.05
NpcdF8VQB8 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
NpcdF8VQB8 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NpcdF8VQB8 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NpcdF8VQB8 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NpcdF8VQB8 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NpcdF8VQB8 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NpcdF8VQB8 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NpcdF8VQB8 Gm24934-201ENSMUST00000103764 111 ntBASIC14.71□□□□□ -0.05
NpcdF8VQB8 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NpcdF8VQB8 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NpcdF8VQB8 Gm27530-201ENSMUST00000184096 98 ntBASIC14.71□□□□□ -0.05
NpcdF8VQB8 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC14.71□□□□□ -0.05
NpcdF8VQB8 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC14.71□□□□□ -0.05
NpcdF8VQB8 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.71□□□□□ -0.05
NpcdF8VQB8 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC14.71□□□□□ -0.05
NpcdF8VQB8 AC134860.1-201ENSMUST00000224867 660 ntBASIC14.71□□□□□ -0.05
NpcdF8VQB8 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NpcdF8VQB8 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.71□□□□□ -0.05
NpcdF8VQB8 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NpcdF8VQB8 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.71□□□□□ -0.05
NpcdF8VQB8 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NpcdF8VQB8 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NpcdF8VQB8 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.71□□□□□ -0.05
NpcdF8VQB8 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NpcdF8VQB8 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
NpcdF8VQB8 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
NpcdF8VQB8 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
NpcdF8VQB8 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NpcdF8VQB8 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
NpcdF8VQB8 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NpcdF8VQB8 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NpcdF8VQB8 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
NpcdF8VQB8 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms