Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Gm14314-201ENSMUST00000118225 1015 ntBASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Selenot-ps-201ENSMUST00000119098 593 ntBASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Gm5419-201ENSMUST00000119301 527 ntBASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Gm27910-201ENSMUST00000185004 107 ntBASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Gm7593-201ENSMUST00000187246 644 ntBASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.11□□□□□ -0.15
Clrn2B2RVW2 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Gm11892-201ENSMUST00000117711 1202 ntBASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Gm15725-201ENSMUST00000119947 1090 ntBASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Gm14247-201ENSMUST00000120950 237 ntBASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Gm13263-201ENSMUST00000121271 838 ntBASIC14.1□□□□□ -0.15
Clrn2B2RVW2 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Gm23771-201ENSMUST00000178702 110 ntBASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 AC166344.1-201ENSMUST00000223745 674 ntBASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn2B2RVW2 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Gm12579-201ENSMUST00000118040 783 ntBASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Gm10731-201ENSMUST00000181171 448 ntBASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Mir8115-201ENSMUST00000184992 119 ntBASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms