Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Gm35713-201ENSMUST00000210516 199 ntBASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.32□□□□□ -0.44
Col4a6B1AVK5 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 CT573086.4-201ENSMUST00000226729 342 ntBASIC12.32□□□□□ -0.44
Col4a6B1AVK5 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Gm10263-201ENSMUST00000085163 300 ntBASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Gm12179-201ENSMUST00000118344 1272 ntBASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Gm13117-201ENSMUST00000120894 691 ntBASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Gm12783-201ENSMUST00000121425 397 ntBASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Gm15036-201ENSMUST00000118880 400 ntBASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Gm12036-201ENSMUST00000120008 530 ntBASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Gm12274-201ENSMUST00000120062 385 ntBASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Gm43778-201ENSMUST00000199438 199 ntBASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Gm43380-201ENSMUST00000200421 220 ntBASIC12.31□□□□□ -0.44
Col4a6B1AVK5 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Gm4604-201ENSMUST00000025040 390 ntBASIC12.31□□□□□ -0.44
Col4a6B1AVK5 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a6B1AVK5 Acot6-202ENSMUST00000222921 3622 ntBASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Gm9135-201ENSMUST00000182963 990 ntBASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a6B1AVK5 Gm45856-201ENSMUST00000212752 416 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms