Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm19187-201ENSMUST00000206781 892 ntBASIC11.96□□□□□ -0.49
Chd3B1AR17 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chd3B1AR17 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Chd3B1AR17 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.96□□□□□ -0.49
Chd3B1AR17 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd3B1AR17 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Chd3B1AR17 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd3B1AR17 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.96□□□□□ -0.49
Chd3B1AR17 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd3B1AR17 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd3B1AR17 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chd3B1AR17 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chd3B1AR17 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chd3B1AR17 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Chd3B1AR17 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.96□□□□□ -0.49
Chd3B1AR17 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Chd3B1AR17 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd3B1AR17 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.96□□□□□ -0.49
Chd3B1AR17 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Chd3B1AR17 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chd3B1AR17 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Chd3B1AR17 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Chd3B1AR17 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chd3B1AR17 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Chd3B1AR17 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.96□□□□□ -0.5
Chd3B1AR17 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Chd3B1AR17 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.96□□□□□ -0.5
Chd3B1AR17 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Chd3B1AR17 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.96□□□□□ -0.5
Chd3B1AR17 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.96□□□□□ -0.5
Chd3B1AR17 Gm8100-201ENSMUST00000182906 988 ntBASIC11.96□□□□□ -0.5
Chd3B1AR17 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.96□□□□□ -0.5
Chd3B1AR17 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.5
Chd3B1AR17 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Chd3B1AR17 Gm9797-202ENSMUST00000218003 294 ntBASIC11.96□□□□□ -0.5
Chd3B1AR17 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chd3B1AR17 Ntng1-201ENSMUST00000051253 327 ntBASIC11.96□□□□□ -0.5
Chd3B1AR17 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chd3B1AR17 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chd3B1AR17 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chd3B1AR17 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chd3B1AR17 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chd3B1AR17 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Chd3B1AR17 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.96□□□□□ -0.5
Chd3B1AR17 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chd3B1AR17 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chd3B1AR17 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Chd3B1AR17 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Chd3B1AR17 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chd3B1AR17 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Chd3B1AR17 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd3B1AR17 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.95□□□□□ -0.5
Chd3B1AR17 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd3B1AR17 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.95□□□□□ -0.5
Chd3B1AR17 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.95□□□□□ -0.5
Chd3B1AR17 Gm11450-201ENSMUST00000121144 333 ntBASIC11.95□□□□□ -0.5
Chd3B1AR17 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.95□□□□□ -0.5
Chd3B1AR17 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chd3B1AR17 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Chd3B1AR17 Gm17931-201ENSMUST00000208132 634 ntBASIC11.95□□□□□ -0.5
Chd3B1AR17 Gm45598-202ENSMUST00000210719 986 ntBASIC11.95□□□□□ -0.5
Chd3B1AR17 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd3B1AR17 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd3B1AR17 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Chd3B1AR17 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.95□□□□□ -0.5
Chd3B1AR17 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Chd3B1AR17 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd3B1AR17 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd3B1AR17 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chd3B1AR17 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd3B1AR17 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chd3B1AR17 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd3B1AR17 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.95□□□□□ -0.5
Chd3B1AR17 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.95□□□□□ -0.5
Chd3B1AR17 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.95□□□□□ -0.5
Chd3B1AR17 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chd3B1AR17 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.95□□□□□ -0.5
Chd3B1AR17 Gm15515-201ENSMUST00000117827 822 ntBASIC11.95□□□□□ -0.5
Chd3B1AR17 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.95□□□□□ -0.5
Chd3B1AR17 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chd3B1AR17 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chd3B1AR17 Gm5705-201ENSMUST00000066241 711 ntBASIC11.95□□□□□ -0.5
Chd3B1AR17 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chd3B1AR17 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd3B1AR17 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.94□□□□□ -0.5
Chd3B1AR17 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd3B1AR17 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Chd3B1AR17 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd3B1AR17 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd3B1AR17 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.94□□□□□ -0.5
Chd3B1AR17 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd3B1AR17 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chd3B1AR17 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Chd3B1AR17 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd3B1AR17 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chd3B1AR17 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd3B1AR17 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.94□□□□□ -0.5
Chd3B1AR17 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd3B1AR17 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chd3B1AR17 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms