Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Gm40881-201ENSMUST00000223397 166 ntBASIC20.65■□□□□ 0.9
Mrpl40Q9Z2Q5 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mrpl40Q9Z2Q5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mrpl40Q9Z2Q5 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mrpl40Q9Z2Q5 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.65■□□□□ 0.9
Mrpl40Q9Z2Q5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mrpl40Q9Z2Q5 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Mrpl40Q9Z2Q5 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mrpl40Q9Z2Q5 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mrpl40Q9Z2Q5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mrpl40Q9Z2Q5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.64■□□□□ 0.89
Mrpl40Q9Z2Q5 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mrpl40Q9Z2Q5 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.64■□□□□ 0.89
Mrpl40Q9Z2Q5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mrpl40Q9Z2Q5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Mrpl40Q9Z2Q5 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mrpl40Q9Z2Q5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mrpl40Q9Z2Q5 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mrpl40Q9Z2Q5 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.63■□□□□ 0.89
Mrpl40Q9Z2Q5 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mrpl40Q9Z2Q5 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mrpl40Q9Z2Q5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mrpl40Q9Z2Q5 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.63■□□□□ 0.89
Mrpl40Q9Z2Q5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Mrpl40Q9Z2Q5 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mrpl40Q9Z2Q5 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mrpl40Q9Z2Q5 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mrpl40Q9Z2Q5 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.62■□□□□ 0.89
Mrpl40Q9Z2Q5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mrpl40Q9Z2Q5 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.62■□□□□ 0.89
Mrpl40Q9Z2Q5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Mrpl40Q9Z2Q5 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.62■□□□□ 0.89
Mrpl40Q9Z2Q5 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Mrpl40Q9Z2Q5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mrpl40Q9Z2Q5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.62■□□□□ 0.89
Mrpl40Q9Z2Q5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mrpl40Q9Z2Q5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mrpl40Q9Z2Q5 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.61■□□□□ 0.89
Mrpl40Q9Z2Q5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mrpl40Q9Z2Q5 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Mrpl40Q9Z2Q5 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mrpl40Q9Z2Q5 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mrpl40Q9Z2Q5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Mrpl40Q9Z2Q5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mrpl40Q9Z2Q5 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.6■□□□□ 0.89
Mrpl40Q9Z2Q5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mrpl40Q9Z2Q5 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Mrpl40Q9Z2Q5 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mrpl40Q9Z2Q5 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mrpl40Q9Z2Q5 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mrpl40Q9Z2Q5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.6■□□□□ 0.89
Mrpl40Q9Z2Q5 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Mrpl40Q9Z2Q5 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Mrpl40Q9Z2Q5 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mrpl40Q9Z2Q5 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mrpl40Q9Z2Q5 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mrpl40Q9Z2Q5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Mrpl40Q9Z2Q5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.59■□□□□ 0.89
Mrpl40Q9Z2Q5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mrpl40Q9Z2Q5 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mrpl40Q9Z2Q5 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.58■□□□□ 0.89
Mrpl40Q9Z2Q5 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mrpl40Q9Z2Q5 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Mrpl40Q9Z2Q5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Mrpl40Q9Z2Q5 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Mrpl40Q9Z2Q5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mrpl40Q9Z2Q5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mrpl40Q9Z2Q5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mrpl40Q9Z2Q5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mrpl40Q9Z2Q5 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mrpl40Q9Z2Q5 Gm22238-201ENSMUST00000175222 88 ntBASIC20.57■□□□□ 0.88
Mrpl40Q9Z2Q5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Mrpl40Q9Z2Q5 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mrpl40Q9Z2Q5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.57■□□□□ 0.88
Mrpl40Q9Z2Q5 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mrpl40Q9Z2Q5 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mrpl40Q9Z2Q5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mrpl40Q9Z2Q5 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mrpl40Q9Z2Q5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mrpl40Q9Z2Q5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mrpl40Q9Z2Q5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Mrpl40Q9Z2Q5 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Mrpl40Q9Z2Q5 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mrpl40Q9Z2Q5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Mrpl40Q9Z2Q5 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mrpl40Q9Z2Q5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mrpl40Q9Z2Q5 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mrpl40Q9Z2Q5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Mrpl40Q9Z2Q5 Gm10399-202ENSMUST00000202768 748 ntBASIC20.55■□□□□ 0.88
Mrpl40Q9Z2Q5 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Mrpl40Q9Z2Q5 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mrpl40Q9Z2Q5 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Mrpl40Q9Z2Q5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mrpl40Q9Z2Q5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mrpl40Q9Z2Q5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mrpl40Q9Z2Q5 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Mrpl40Q9Z2Q5 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mrpl40Q9Z2Q5 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mrpl40Q9Z2Q5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mrpl40Q9Z2Q5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms