Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.49■□□□□ 0.71
Cldn6Q9Z262 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn6Q9Z262 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Cldn6Q9Z262 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.49■□□□□ 0.71
Cldn6Q9Z262 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn6Q9Z262 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn6Q9Z262 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn6Q9Z262 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn6Q9Z262 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn6Q9Z262 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn6Q9Z262 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Cldn6Q9Z262 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn6Q9Z262 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn6Q9Z262 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.47■□□□□ 0.71
Cldn6Q9Z262 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn6Q9Z262 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn6Q9Z262 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn6Q9Z262 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn6Q9Z262 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn6Q9Z262 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn6Q9Z262 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn6Q9Z262 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn6Q9Z262 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn6Q9Z262 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn6Q9Z262 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn6Q9Z262 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn6Q9Z262 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn6Q9Z262 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn6Q9Z262 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn6Q9Z262 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn6Q9Z262 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn6Q9Z262 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.45■□□□□ 0.7
Cldn6Q9Z262 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn6Q9Z262 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn6Q9Z262 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cldn6Q9Z262 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.45■□□□□ 0.7
Cldn6Q9Z262 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn6Q9Z262 Gm10232-201ENSMUST00000089221 720 ntBASIC19.45■□□□□ 0.7
Cldn6Q9Z262 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.45■□□□□ 0.7
Cldn6Q9Z262 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn6Q9Z262 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn6Q9Z262 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn6Q9Z262 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn6Q9Z262 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Cldn6Q9Z262 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn6Q9Z262 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn6Q9Z262 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn6Q9Z262 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn6Q9Z262 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.44■□□□□ 0.7
Cldn6Q9Z262 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.44■□□□□ 0.7
Cldn6Q9Z262 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn6Q9Z262 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn6Q9Z262 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn6Q9Z262 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn6Q9Z262 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cldn6Q9Z262 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.43■□□□□ 0.7
Cldn6Q9Z262 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn6Q9Z262 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.43■□□□□ 0.7
Cldn6Q9Z262 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn6Q9Z262 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.43■□□□□ 0.7
Cldn6Q9Z262 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn6Q9Z262 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.43■□□□□ 0.7
Cldn6Q9Z262 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn6Q9Z262 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn6Q9Z262 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Cldn6Q9Z262 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn6Q9Z262 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn6Q9Z262 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Cldn6Q9Z262 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn6Q9Z262 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn6Q9Z262 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn6Q9Z262 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn6Q9Z262 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn6Q9Z262 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn6Q9Z262 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn6Q9Z262 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cldn6Q9Z262 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn6Q9Z262 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn6Q9Z262 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cldn6Q9Z262 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn6Q9Z262 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn6Q9Z262 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn6Q9Z262 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn6Q9Z262 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.4■□□□□ 0.7
Cldn6Q9Z262 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.4■□□□□ 0.7
Cldn6Q9Z262 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cldn6Q9Z262 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn6Q9Z262 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn6Q9Z262 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn6Q9Z262 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn6Q9Z262 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn6Q9Z262 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn6Q9Z262 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cldn6Q9Z262 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Cldn6Q9Z262 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn6Q9Z262 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
Cldn6Q9Z262 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn6Q9Z262 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn6Q9Z262 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn6Q9Z262 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms