Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shroom3Q9QXN0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.96■□□□□ 0.95
Shroom3Q9QXN0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.96■□□□□ 0.95
Shroom3Q9QXN0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shroom3Q9QXN0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shroom3Q9QXN0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Shroom3Q9QXN0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Shroom3Q9QXN0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Shroom3Q9QXN0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.96■□□□□ 0.95
Shroom3Q9QXN0 Gm7417-201ENSMUST00000192950 473 ntBASIC20.96■□□□□ 0.95
Shroom3Q9QXN0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shroom3Q9QXN0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.95■□□□□ 0.94
Shroom3Q9QXN0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shroom3Q9QXN0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shroom3Q9QXN0 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.95■□□□□ 0.94
Shroom3Q9QXN0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shroom3Q9QXN0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Shroom3Q9QXN0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Shroom3Q9QXN0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shroom3Q9QXN0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.94■□□□□ 0.94
Shroom3Q9QXN0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.94■□□□□ 0.94
Shroom3Q9QXN0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shroom3Q9QXN0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shroom3Q9QXN0 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.94■□□□□ 0.94
Shroom3Q9QXN0 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.94■□□□□ 0.94
Shroom3Q9QXN0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shroom3Q9QXN0 Gm13241-201ENSMUST00000094493 780 ntBASIC20.94■□□□□ 0.94
Shroom3Q9QXN0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shroom3Q9QXN0 Gm22238-201ENSMUST00000175222 88 ntBASIC20.93■□□□□ 0.94
Shroom3Q9QXN0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shroom3Q9QXN0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shroom3Q9QXN0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.93■□□□□ 0.94
Shroom3Q9QXN0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shroom3Q9QXN0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.92■□□□□ 0.94
Shroom3Q9QXN0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Shroom3Q9QXN0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shroom3Q9QXN0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shroom3Q9QXN0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shroom3Q9QXN0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Shroom3Q9QXN0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Shroom3Q9QXN0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shroom3Q9QXN0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.91■□□□□ 0.94
Shroom3Q9QXN0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shroom3Q9QXN0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom3Q9QXN0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom3Q9QXN0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom3Q9QXN0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom3Q9QXN0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom3Q9QXN0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom3Q9QXN0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom3Q9QXN0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom3Q9QXN0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom3Q9QXN0 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.9■□□□□ 0.94
Shroom3Q9QXN0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.9■□□□□ 0.94
Shroom3Q9QXN0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Shroom3Q9QXN0 Gm9847-201ENSMUST00000052528 599 ntBASIC20.9■□□□□ 0.94
Shroom3Q9QXN0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shroom3Q9QXN0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Shroom3Q9QXN0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.89■□□□□ 0.94
Shroom3Q9QXN0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shroom3Q9QXN0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Shroom3Q9QXN0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shroom3Q9QXN0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Shroom3Q9QXN0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shroom3Q9QXN0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shroom3Q9QXN0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shroom3Q9QXN0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shroom3Q9QXN0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.88■□□□□ 0.93
Shroom3Q9QXN0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shroom3Q9QXN0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Shroom3Q9QXN0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shroom3Q9QXN0 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.88■□□□□ 0.93
Shroom3Q9QXN0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.88■□□□□ 0.93
Shroom3Q9QXN0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Shroom3Q9QXN0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.87■□□□□ 0.93
Shroom3Q9QXN0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Shroom3Q9QXN0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Shroom3Q9QXN0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Shroom3Q9QXN0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shroom3Q9QXN0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Shroom3Q9QXN0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shroom3Q9QXN0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Shroom3Q9QXN0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shroom3Q9QXN0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shroom3Q9QXN0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.86■□□□□ 0.93
Shroom3Q9QXN0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.86■□□□□ 0.93
Shroom3Q9QXN0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shroom3Q9QXN0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.86■□□□□ 0.93
Shroom3Q9QXN0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shroom3Q9QXN0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shroom3Q9QXN0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shroom3Q9QXN0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Shroom3Q9QXN0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shroom3Q9QXN0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.85■□□□□ 0.93
Shroom3Q9QXN0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.85■□□□□ 0.93
Shroom3Q9QXN0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shroom3Q9QXN0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shroom3Q9QXN0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shroom3Q9QXN0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Shroom3Q9QXN0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 189.1 ms