Protein–RNA interactions for Protein: Q9JJC9

Herpud2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud2Q9JJC9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Herpud2Q9JJC9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.86■□□□□ 0.93
Herpud2Q9JJC9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Herpud2Q9JJC9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Herpud2Q9JJC9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Herpud2Q9JJC9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Herpud2Q9JJC9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Herpud2Q9JJC9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Herpud2Q9JJC9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.85■□□□□ 0.93
Herpud2Q9JJC9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Herpud2Q9JJC9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Herpud2Q9JJC9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Herpud2Q9JJC9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Herpud2Q9JJC9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Herpud2Q9JJC9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Herpud2Q9JJC9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Herpud2Q9JJC9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.84■□□□□ 0.93
Herpud2Q9JJC9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Herpud2Q9JJC9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Herpud2Q9JJC9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Herpud2Q9JJC9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Herpud2Q9JJC9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Herpud2Q9JJC9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Herpud2Q9JJC9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Herpud2Q9JJC9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.82■□□□□ 0.92
Herpud2Q9JJC9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Herpud2Q9JJC9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Herpud2Q9JJC9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Herpud2Q9JJC9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Herpud2Q9JJC9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.81■□□□□ 0.92
Herpud2Q9JJC9 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.81■□□□□ 0.92
Herpud2Q9JJC9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.81■□□□□ 0.92
Herpud2Q9JJC9 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.81■□□□□ 0.92
Herpud2Q9JJC9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Herpud2Q9JJC9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Herpud2Q9JJC9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Herpud2Q9JJC9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.8■□□□□ 0.92
Herpud2Q9JJC9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.8■□□□□ 0.92
Herpud2Q9JJC9 Gm43137-201ENSMUST00000198052 594 ntBASIC20.8■□□□□ 0.92
Herpud2Q9JJC9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Herpud2Q9JJC9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Herpud2Q9JJC9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.79■□□□□ 0.92
Herpud2Q9JJC9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Herpud2Q9JJC9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Herpud2Q9JJC9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Herpud2Q9JJC9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Herpud2Q9JJC9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Herpud2Q9JJC9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Herpud2Q9JJC9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Herpud2Q9JJC9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Herpud2Q9JJC9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Herpud2Q9JJC9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Herpud2Q9JJC9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Herpud2Q9JJC9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Herpud2Q9JJC9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Herpud2Q9JJC9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Herpud2Q9JJC9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Herpud2Q9JJC9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Herpud2Q9JJC9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.77■□□□□ 0.91
Herpud2Q9JJC9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Herpud2Q9JJC9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Herpud2Q9JJC9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Herpud2Q9JJC9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Herpud2Q9JJC9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Herpud2Q9JJC9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Herpud2Q9JJC9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Herpud2Q9JJC9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Herpud2Q9JJC9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Herpud2Q9JJC9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Herpud2Q9JJC9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.75■□□□□ 0.91
Herpud2Q9JJC9 Gm6139-201ENSMUST00000079261 882 ntBASIC20.75■□□□□ 0.91
Herpud2Q9JJC9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Herpud2Q9JJC9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.75■□□□□ 0.91
Herpud2Q9JJC9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Herpud2Q9JJC9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Herpud2Q9JJC9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Herpud2Q9JJC9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Herpud2Q9JJC9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Herpud2Q9JJC9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Herpud2Q9JJC9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Herpud2Q9JJC9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.74■□□□□ 0.91
Herpud2Q9JJC9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Herpud2Q9JJC9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Herpud2Q9JJC9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Herpud2Q9JJC9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Herpud2Q9JJC9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Herpud2Q9JJC9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Herpud2Q9JJC9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Herpud2Q9JJC9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Herpud2Q9JJC9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Herpud2Q9JJC9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.73■□□□□ 0.91
Herpud2Q9JJC9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Herpud2Q9JJC9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Herpud2Q9JJC9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Herpud2Q9JJC9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Herpud2Q9JJC9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.72■□□□□ 0.91
Herpud2Q9JJC9 Mir7075-201ENSMUST00000184187 82 ntBASIC20.72■□□□□ 0.91
Herpud2Q9JJC9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.72■□□□□ 0.91
Herpud2Q9JJC9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Herpud2Q9JJC9 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms