Protein–RNA interactions for Protein: Q9ESJ4

Nckipsd, NCK-interacting protein with SH3 domain, mousemouse

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NckipsdQ9ESJ4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
NckipsdQ9ESJ4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.73■■□□□ 1.07
NckipsdQ9ESJ4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
NckipsdQ9ESJ4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NckipsdQ9ESJ4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NckipsdQ9ESJ4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.72■■□□□ 1.07
NckipsdQ9ESJ4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.72■■□□□ 1.07
NckipsdQ9ESJ4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
NckipsdQ9ESJ4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
NckipsdQ9ESJ4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NckipsdQ9ESJ4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NckipsdQ9ESJ4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NckipsdQ9ESJ4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NckipsdQ9ESJ4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.71■■□□□ 1.07
NckipsdQ9ESJ4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
NckipsdQ9ESJ4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NckipsdQ9ESJ4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NckipsdQ9ESJ4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
NckipsdQ9ESJ4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NckipsdQ9ESJ4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NckipsdQ9ESJ4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.7■■□□□ 1.06
NckipsdQ9ESJ4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NckipsdQ9ESJ4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NckipsdQ9ESJ4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NckipsdQ9ESJ4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NckipsdQ9ESJ4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.7■■□□□ 1.06
NckipsdQ9ESJ4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NckipsdQ9ESJ4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NckipsdQ9ESJ4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NckipsdQ9ESJ4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
NckipsdQ9ESJ4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NckipsdQ9ESJ4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
NckipsdQ9ESJ4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.69■■□□□ 1.06
NckipsdQ9ESJ4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
NckipsdQ9ESJ4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
NckipsdQ9ESJ4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NckipsdQ9ESJ4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NckipsdQ9ESJ4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
NckipsdQ9ESJ4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NckipsdQ9ESJ4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NckipsdQ9ESJ4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NckipsdQ9ESJ4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NckipsdQ9ESJ4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
NckipsdQ9ESJ4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NckipsdQ9ESJ4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NckipsdQ9ESJ4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NckipsdQ9ESJ4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NckipsdQ9ESJ4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NckipsdQ9ESJ4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
NckipsdQ9ESJ4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NckipsdQ9ESJ4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
NckipsdQ9ESJ4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NckipsdQ9ESJ4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NckipsdQ9ESJ4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NckipsdQ9ESJ4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
NckipsdQ9ESJ4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NckipsdQ9ESJ4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NckipsdQ9ESJ4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
NckipsdQ9ESJ4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NckipsdQ9ESJ4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NckipsdQ9ESJ4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NckipsdQ9ESJ4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NckipsdQ9ESJ4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
NckipsdQ9ESJ4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NckipsdQ9ESJ4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.65■■□□□ 1.06
NckipsdQ9ESJ4 Gm7143-201ENSMUST00000222811 859 ntBASIC21.65■■□□□ 1.06
NckipsdQ9ESJ4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NckipsdQ9ESJ4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
NckipsdQ9ESJ4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NckipsdQ9ESJ4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.64■■□□□ 1.05
NckipsdQ9ESJ4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NckipsdQ9ESJ4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
NckipsdQ9ESJ4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.64■■□□□ 1.05
NckipsdQ9ESJ4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
NckipsdQ9ESJ4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
NckipsdQ9ESJ4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NckipsdQ9ESJ4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NckipsdQ9ESJ4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NckipsdQ9ESJ4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.63■■□□□ 1.05
NckipsdQ9ESJ4 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.63■■□□□ 1.05
NckipsdQ9ESJ4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NckipsdQ9ESJ4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NckipsdQ9ESJ4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NckipsdQ9ESJ4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NckipsdQ9ESJ4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NckipsdQ9ESJ4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NckipsdQ9ESJ4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
NckipsdQ9ESJ4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
NckipsdQ9ESJ4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
NckipsdQ9ESJ4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NckipsdQ9ESJ4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NckipsdQ9ESJ4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NckipsdQ9ESJ4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NckipsdQ9ESJ4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.62■■□□□ 1.05
NckipsdQ9ESJ4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
NckipsdQ9ESJ4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NckipsdQ9ESJ4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NckipsdQ9ESJ4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NckipsdQ9ESJ4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NckipsdQ9ESJ4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms