Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp1bQ9EPL6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp1bQ9EPL6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Mmp1bQ9EPL6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp1bQ9EPL6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp1bQ9EPL6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp1bQ9EPL6 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.22■□□□□ 0.51
Mmp1bQ9EPL6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp1bQ9EPL6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.22■□□□□ 0.51
Mmp1bQ9EPL6 Gm12366-201ENSMUST00000121722 873 ntBASIC18.22■□□□□ 0.51
Mmp1bQ9EPL6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.22■□□□□ 0.51
Mmp1bQ9EPL6 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.22■□□□□ 0.51
Mmp1bQ9EPL6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.22■□□□□ 0.51
Mmp1bQ9EPL6 Gm5786-201ENSMUST00000085368 882 ntBASIC18.22■□□□□ 0.51
Mmp1bQ9EPL6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp1bQ9EPL6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp1bQ9EPL6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp1bQ9EPL6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp1bQ9EPL6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp1bQ9EPL6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Mmp1bQ9EPL6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp1bQ9EPL6 Gm7332-201ENSMUST00000118351 454 ntBASIC18.21■□□□□ 0.51
Mmp1bQ9EPL6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp1bQ9EPL6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp1bQ9EPL6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp1bQ9EPL6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp1bQ9EPL6 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.21■□□□□ 0.51
Mmp1bQ9EPL6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Mmp1bQ9EPL6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Mmp1bQ9EPL6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp1bQ9EPL6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp1bQ9EPL6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp1bQ9EPL6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp1bQ9EPL6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp1bQ9EPL6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Mmp1bQ9EPL6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp1bQ9EPL6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.2■□□□□ 0.5
Mmp1bQ9EPL6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp1bQ9EPL6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp1bQ9EPL6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp1bQ9EPL6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp1bQ9EPL6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp1bQ9EPL6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp1bQ9EPL6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Mmp1bQ9EPL6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp1bQ9EPL6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp1bQ9EPL6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp1bQ9EPL6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp1bQ9EPL6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Mmp1bQ9EPL6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp1bQ9EPL6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp1bQ9EPL6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp1bQ9EPL6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Mmp1bQ9EPL6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp1bQ9EPL6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp1bQ9EPL6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp1bQ9EPL6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp1bQ9EPL6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp1bQ9EPL6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp1bQ9EPL6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Mmp1bQ9EPL6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp1bQ9EPL6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.17■□□□□ 0.5
Mmp1bQ9EPL6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp1bQ9EPL6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp1bQ9EPL6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp1bQ9EPL6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.17■□□□□ 0.5
Mmp1bQ9EPL6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.17■□□□□ 0.5
Mmp1bQ9EPL6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.17■□□□□ 0.5
Mmp1bQ9EPL6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp1bQ9EPL6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp1bQ9EPL6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp1bQ9EPL6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp1bQ9EPL6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp1bQ9EPL6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp1bQ9EPL6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp1bQ9EPL6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp1bQ9EPL6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mmp1bQ9EPL6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Mmp1bQ9EPL6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mmp1bQ9EPL6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Mmp1bQ9EPL6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.16■□□□□ 0.5
Mmp1bQ9EPL6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.16■□□□□ 0.5
Mmp1bQ9EPL6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mmp1bQ9EPL6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mmp1bQ9EPL6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mmp1bQ9EPL6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mmp1bQ9EPL6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Mmp1bQ9EPL6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Mmp1bQ9EPL6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Mmp1bQ9EPL6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp1bQ9EPL6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp1bQ9EPL6 Iqck-206ENSMUST00000208658 2891 ntBASIC18.15■□□□□ 0.5
Mmp1bQ9EPL6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp1bQ9EPL6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp1bQ9EPL6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp1bQ9EPL6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp1bQ9EPL6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Mmp1bQ9EPL6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp1bQ9EPL6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Mmp1bQ9EPL6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms