Protein–RNA interactions for Protein: Q9D8B4

Ndufa11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa11Q9D8B4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ndufa11Q9D8B4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ndufa11Q9D8B4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ndufa11Q9D8B4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ndufa11Q9D8B4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.17■□□□□ 0.5
Ndufa11Q9D8B4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ndufa11Q9D8B4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ndufa11Q9D8B4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ndufa11Q9D8B4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ndufa11Q9D8B4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ndufa11Q9D8B4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ndufa11Q9D8B4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ndufa11Q9D8B4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ndufa11Q9D8B4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ndufa11Q9D8B4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.15■□□□□ 0.5
Ndufa11Q9D8B4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Ndufa11Q9D8B4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ndufa11Q9D8B4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ndufa11Q9D8B4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.15■□□□□ 0.5
Ndufa11Q9D8B4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ndufa11Q9D8B4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ndufa11Q9D8B4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.15■□□□□ 0.5
Ndufa11Q9D8B4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ndufa11Q9D8B4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ndufa11Q9D8B4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ndufa11Q9D8B4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ndufa11Q9D8B4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ndufa11Q9D8B4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.14■□□□□ 0.49
Ndufa11Q9D8B4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.14■□□□□ 0.49
Ndufa11Q9D8B4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ndufa11Q9D8B4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.14■□□□□ 0.49
Ndufa11Q9D8B4 Gm43060-201ENSMUST00000200621 289 ntBASIC18.14■□□□□ 0.49
Ndufa11Q9D8B4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ndufa11Q9D8B4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ndufa11Q9D8B4 Gm10493-201ENSMUST00000097270 612 ntBASIC18.14■□□□□ 0.49
Ndufa11Q9D8B4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ndufa11Q9D8B4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ndufa11Q9D8B4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ndufa11Q9D8B4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ndufa11Q9D8B4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ndufa11Q9D8B4 Gm42569-201ENSMUST00000200539 472 ntBASIC18.13■□□□□ 0.49
Ndufa11Q9D8B4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ndufa11Q9D8B4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ndufa11Q9D8B4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ndufa11Q9D8B4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ndufa11Q9D8B4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ndufa11Q9D8B4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ndufa11Q9D8B4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ndufa11Q9D8B4 Gm27405-201ENSMUST00000184201 112 ntBASIC18.12■□□□□ 0.49
Ndufa11Q9D8B4 Spcs1-204ENSMUST00000226782 949 ntBASIC18.12■□□□□ 0.49
Ndufa11Q9D8B4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ndufa11Q9D8B4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ndufa11Q9D8B4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ndufa11Q9D8B4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ndufa11Q9D8B4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.12■□□□□ 0.49
Ndufa11Q9D8B4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ndufa11Q9D8B4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ndufa11Q9D8B4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.11■□□□□ 0.49
Ndufa11Q9D8B4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Ndufa11Q9D8B4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Ndufa11Q9D8B4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ndufa11Q9D8B4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ndufa11Q9D8B4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Ndufa11Q9D8B4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
Ndufa11Q9D8B4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ndufa11Q9D8B4 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.1■□□□□ 0.49
Ndufa11Q9D8B4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ndufa11Q9D8B4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ndufa11Q9D8B4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.1■□□□□ 0.49
Ndufa11Q9D8B4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ndufa11Q9D8B4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.1■□□□□ 0.49
Ndufa11Q9D8B4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ndufa11Q9D8B4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Ndufa11Q9D8B4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ndufa11Q9D8B4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Ndufa11Q9D8B4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
Ndufa11Q9D8B4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Ndufa11Q9D8B4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ndufa11Q9D8B4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.08■□□□□ 0.49
Ndufa11Q9D8B4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ndufa11Q9D8B4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ndufa11Q9D8B4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ndufa11Q9D8B4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.08■□□□□ 0.48
Ndufa11Q9D8B4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.08■□□□□ 0.48
Ndufa11Q9D8B4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
Ndufa11Q9D8B4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ndufa11Q9D8B4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Ndufa11Q9D8B4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Ndufa11Q9D8B4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ndufa11Q9D8B4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ndufa11Q9D8B4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Ndufa11Q9D8B4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ndufa11Q9D8B4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ndufa11Q9D8B4 Gm43530-201ENSMUST00000195920 274 ntBASIC18.07■□□□□ 0.48
Ndufa11Q9D8B4 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.07■□□□□ 0.48
Ndufa11Q9D8B4 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.07■□□□□ 0.48
Ndufa11Q9D8B4 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.07■□□□□ 0.48
Ndufa11Q9D8B4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.07■□□□□ 0.48
Ndufa11Q9D8B4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ndufa11Q9D8B4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms