Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.01■□□□□ 0.47
Hcfc1r1Q9CYQ5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hcfc1r1Q9CYQ5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hcfc1r1Q9CYQ5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hcfc1r1Q9CYQ5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hcfc1r1Q9CYQ5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hcfc1r1Q9CYQ5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hcfc1r1Q9CYQ5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hcfc1r1Q9CYQ5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Hcfc1r1Q9CYQ5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hcfc1r1Q9CYQ5 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hcfc1r1Q9CYQ5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
Hcfc1r1Q9CYQ5 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18■□□□□ 0.47
Hcfc1r1Q9CYQ5 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hcfc1r1Q9CYQ5 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcfc1r1Q9CYQ5 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hcfc1r1Q9CYQ5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.99■□□□□ 0.47
Hcfc1r1Q9CYQ5 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcfc1r1Q9CYQ5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.99■□□□□ 0.47
Hcfc1r1Q9CYQ5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcfc1r1Q9CYQ5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcfc1r1Q9CYQ5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcfc1r1Q9CYQ5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hcfc1r1Q9CYQ5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcfc1r1Q9CYQ5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Hcfc1r1Q9CYQ5 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Hcfc1r1Q9CYQ5 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hcfc1r1Q9CYQ5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hcfc1r1Q9CYQ5 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.98■□□□□ 0.47
Hcfc1r1Q9CYQ5 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hcfc1r1Q9CYQ5 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hcfc1r1Q9CYQ5 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hcfc1r1Q9CYQ5 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hcfc1r1Q9CYQ5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hcfc1r1Q9CYQ5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hcfc1r1Q9CYQ5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hcfc1r1Q9CYQ5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.97■□□□□ 0.47
Hcfc1r1Q9CYQ5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.97■□□□□ 0.47
Hcfc1r1Q9CYQ5 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Hcfc1r1Q9CYQ5 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hcfc1r1Q9CYQ5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Hcfc1r1Q9CYQ5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Hcfc1r1Q9CYQ5 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hcfc1r1Q9CYQ5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hcfc1r1Q9CYQ5 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.96■□□□□ 0.47
Hcfc1r1Q9CYQ5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hcfc1r1Q9CYQ5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hcfc1r1Q9CYQ5 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hcfc1r1Q9CYQ5 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Hcfc1r1Q9CYQ5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Hcfc1r1Q9CYQ5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Hcfc1r1Q9CYQ5 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hcfc1r1Q9CYQ5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hcfc1r1Q9CYQ5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hcfc1r1Q9CYQ5 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.95■□□□□ 0.46
Hcfc1r1Q9CYQ5 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.95■□□□□ 0.46
Hcfc1r1Q9CYQ5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hcfc1r1Q9CYQ5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hcfc1r1Q9CYQ5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Hcfc1r1Q9CYQ5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hcfc1r1Q9CYQ5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcfc1r1Q9CYQ5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hcfc1r1Q9CYQ5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hcfc1r1Q9CYQ5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hcfc1r1Q9CYQ5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcfc1r1Q9CYQ5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcfc1r1Q9CYQ5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcfc1r1Q9CYQ5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Hcfc1r1Q9CYQ5 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.94■□□□□ 0.46
Hcfc1r1Q9CYQ5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcfc1r1Q9CYQ5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcfc1r1Q9CYQ5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcfc1r1Q9CYQ5 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.93■□□□□ 0.46
Hcfc1r1Q9CYQ5 Gm6311-201ENSMUST00000073790 878 ntBASIC17.93■□□□□ 0.46
Hcfc1r1Q9CYQ5 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.93■□□□□ 0.46
Hcfc1r1Q9CYQ5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.93■□□□□ 0.46
Hcfc1r1Q9CYQ5 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Hcfc1r1Q9CYQ5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Hcfc1r1Q9CYQ5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hcfc1r1Q9CYQ5 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.92■□□□□ 0.46
Hcfc1r1Q9CYQ5 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hcfc1r1Q9CYQ5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Hcfc1r1Q9CYQ5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Hcfc1r1Q9CYQ5 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hcfc1r1Q9CYQ5 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hcfc1r1Q9CYQ5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hcfc1r1Q9CYQ5 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hcfc1r1Q9CYQ5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Hcfc1r1Q9CYQ5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hcfc1r1Q9CYQ5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hcfc1r1Q9CYQ5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hcfc1r1Q9CYQ5 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hcfc1r1Q9CYQ5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.91■□□□□ 0.46
Hcfc1r1Q9CYQ5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hcfc1r1Q9CYQ5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hcfc1r1Q9CYQ5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.91■□□□□ 0.46
Hcfc1r1Q9CYQ5 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hcfc1r1Q9CYQ5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hcfc1r1Q9CYQ5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Hcfc1r1Q9CYQ5 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms