Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rnf111Q99ML9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rnf111Q99ML9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf111Q99ML9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.09■□□□□ 0.81
Rnf111Q99ML9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf111Q99ML9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf111Q99ML9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rnf111Q99ML9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf111Q99ML9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Rnf111Q99ML9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf111Q99ML9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rnf111Q99ML9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf111Q99ML9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Rnf111Q99ML9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf111Q99ML9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Rnf111Q99ML9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf111Q99ML9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.08■□□□□ 0.81
Rnf111Q99ML9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf111Q99ML9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf111Q99ML9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf111Q99ML9 Golph3-202ENSMUST00000226517 2359 ntBASIC20.08■□□□□ 0.8
Rnf111Q99ML9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf111Q99ML9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf111Q99ML9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.07■□□□□ 0.8
Rnf111Q99ML9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.07■□□□□ 0.8
Rnf111Q99ML9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf111Q99ML9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf111Q99ML9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.07■□□□□ 0.8
Rnf111Q99ML9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf111Q99ML9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf111Q99ML9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf111Q99ML9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Rnf111Q99ML9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf111Q99ML9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf111Q99ML9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf111Q99ML9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf111Q99ML9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf111Q99ML9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.06■□□□□ 0.8
Rnf111Q99ML9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf111Q99ML9 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.06■□□□□ 0.8
Rnf111Q99ML9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf111Q99ML9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf111Q99ML9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Rnf111Q99ML9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf111Q99ML9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf111Q99ML9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf111Q99ML9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.05■□□□□ 0.8
Rnf111Q99ML9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.05■□□□□ 0.8
Rnf111Q99ML9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf111Q99ML9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf111Q99ML9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf111Q99ML9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Rnf111Q99ML9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf111Q99ML9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf111Q99ML9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf111Q99ML9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf111Q99ML9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rnf111Q99ML9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf111Q99ML9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Rnf111Q99ML9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf111Q99ML9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf111Q99ML9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.04■□□□□ 0.8
Rnf111Q99ML9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf111Q99ML9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rnf111Q99ML9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rnf111Q99ML9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Rnf111Q99ML9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf111Q99ML9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf111Q99ML9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf111Q99ML9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf111Q99ML9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf111Q99ML9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf111Q99ML9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf111Q99ML9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf111Q99ML9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf111Q99ML9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf111Q99ML9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf111Q99ML9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf111Q99ML9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf111Q99ML9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf111Q99ML9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf111Q99ML9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf111Q99ML9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.02■□□□□ 0.8
Rnf111Q99ML9 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.02■□□□□ 0.8
Rnf111Q99ML9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf111Q99ML9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf111Q99ML9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rnf111Q99ML9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Rnf111Q99ML9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf111Q99ML9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Rnf111Q99ML9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf111Q99ML9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf111Q99ML9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf111Q99ML9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.01■□□□□ 0.79
Rnf111Q99ML9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.01■□□□□ 0.79
Rnf111Q99ML9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf111Q99ML9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.01■□□□□ 0.79
Rnf111Q99ML9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Rnf111Q99ML9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf111Q99ML9 Gm10616-201ENSMUST00000205285 2127 ntBASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms