Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha3Q91Y16 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha3Q91Y16 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha3Q91Y16 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.74■■□□□ 1.07
Pcdha3Q91Y16 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha3Q91Y16 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha3Q91Y16 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Pcdha3Q91Y16 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha3Q91Y16 Gm10399-202ENSMUST00000202768 748 ntBASIC21.73■■□□□ 1.07
Pcdha3Q91Y16 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha3Q91Y16 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha3Q91Y16 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha3Q91Y16 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.72■■□□□ 1.07
Pcdha3Q91Y16 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha3Q91Y16 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.72■■□□□ 1.07
Pcdha3Q91Y16 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha3Q91Y16 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.72■■□□□ 1.07
Pcdha3Q91Y16 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Pcdha3Q91Y16 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha3Q91Y16 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha3Q91Y16 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Pcdha3Q91Y16 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha3Q91Y16 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha3Q91Y16 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha3Q91Y16 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.71■■□□□ 1.07
Pcdha3Q91Y16 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.71■■□□□ 1.07
Pcdha3Q91Y16 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha3Q91Y16 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha3Q91Y16 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Pcdha3Q91Y16 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha3Q91Y16 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha3Q91Y16 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Pcdha3Q91Y16 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.7■■□□□ 1.06
Pcdha3Q91Y16 Gm45102-201ENSMUST00000207427 857 ntBASIC21.7■■□□□ 1.06
Pcdha3Q91Y16 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha3Q91Y16 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha3Q91Y16 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha3Q91Y16 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha3Q91Y16 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha3Q91Y16 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
Pcdha3Q91Y16 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha3Q91Y16 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha3Q91Y16 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha3Q91Y16 Notumos-201ENSMUST00000151998 2659 ntBASIC21.69■■□□□ 1.06
Pcdha3Q91Y16 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha3Q91Y16 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha3Q91Y16 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.69■■□□□ 1.06
Pcdha3Q91Y16 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.69■■□□□ 1.06
Pcdha3Q91Y16 Gm9959-201ENSMUST00000068277 390 ntBASIC21.69■■□□□ 1.06
Pcdha3Q91Y16 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha3Q91Y16 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Pcdha3Q91Y16 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha3Q91Y16 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.68■■□□□ 1.06
Pcdha3Q91Y16 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.68■■□□□ 1.06
Pcdha3Q91Y16 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha3Q91Y16 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha3Q91Y16 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha3Q91Y16 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha3Q91Y16 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha3Q91Y16 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.68■■□□□ 1.06
Pcdha3Q91Y16 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha3Q91Y16 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha3Q91Y16 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha3Q91Y16 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.67■■□□□ 1.06
Pcdha3Q91Y16 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Pcdha3Q91Y16 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha3Q91Y16 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha3Q91Y16 Etf1-202ENSMUST00000180351 108 ntBASIC21.67■■□□□ 1.06
Pcdha3Q91Y16 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Pcdha3Q91Y16 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha3Q91Y16 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.66■■□□□ 1.06
Pcdha3Q91Y16 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha3Q91Y16 Gm40881-201ENSMUST00000223397 166 ntBASIC21.66■■□□□ 1.06
Pcdha3Q91Y16 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha3Q91Y16 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha3Q91Y16 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Pcdha3Q91Y16 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha3Q91Y16 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha3Q91Y16 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Pcdha3Q91Y16 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Pcdha3Q91Y16 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha3Q91Y16 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.65■■□□□ 1.06
Pcdha3Q91Y16 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.65■■□□□ 1.06
Pcdha3Q91Y16 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha3Q91Y16 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha3Q91Y16 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Pcdha3Q91Y16 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdha3Q91Y16 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdha3Q91Y16 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdha3Q91Y16 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdha3Q91Y16 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Pcdha3Q91Y16 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha3Q91Y16 Gm14117-201ENSMUST00000122417 843 ntBASIC21.63■■□□□ 1.05
Pcdha3Q91Y16 Gm7417-201ENSMUST00000192950 473 ntBASIC21.63■■□□□ 1.05
Pcdha3Q91Y16 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.63■■□□□ 1.05
Pcdha3Q91Y16 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
Pcdha3Q91Y16 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha3Q91Y16 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
Pcdha3Q91Y16 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha3Q91Y16 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms