Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb1Q91Y08 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
Pcdhb1Q91Y08 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhb1Q91Y08 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhb1Q91Y08 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb1Q91Y08 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb1Q91Y08 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb1Q91Y08 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.65■■□□□ 1.06
Pcdhb1Q91Y08 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.65■■□□□ 1.06
Pcdhb1Q91Y08 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.65■■□□□ 1.06
Pcdhb1Q91Y08 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb1Q91Y08 Gm10232-201ENSMUST00000089221 720 ntBASIC21.65■■□□□ 1.06
Pcdhb1Q91Y08 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb1Q91Y08 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb1Q91Y08 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhb1Q91Y08 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Pcdhb1Q91Y08 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb1Q91Y08 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb1Q91Y08 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb1Q91Y08 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb1Q91Y08 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb1Q91Y08 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb1Q91Y08 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.63■■□□□ 1.05
Pcdhb1Q91Y08 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb1Q91Y08 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.63■■□□□ 1.05
Pcdhb1Q91Y08 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb1Q91Y08 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb1Q91Y08 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Pcdhb1Q91Y08 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb1Q91Y08 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Pcdhb1Q91Y08 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb1Q91Y08 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb1Q91Y08 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Pcdhb1Q91Y08 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb1Q91Y08 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb1Q91Y08 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.61■■□□□ 1.05
Pcdhb1Q91Y08 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb1Q91Y08 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Pcdhb1Q91Y08 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb1Q91Y08 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb1Q91Y08 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb1Q91Y08 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb1Q91Y08 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb1Q91Y08 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb1Q91Y08 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb1Q91Y08 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.6■■□□□ 1.05
Pcdhb1Q91Y08 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb1Q91Y08 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Pcdhb1Q91Y08 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb1Q91Y08 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb1Q91Y08 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb1Q91Y08 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb1Q91Y08 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb1Q91Y08 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb1Q91Y08 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Pcdhb1Q91Y08 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb1Q91Y08 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb1Q91Y08 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb1Q91Y08 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb1Q91Y08 Gm10399-202ENSMUST00000202768 748 ntBASIC21.59■■□□□ 1.05
Pcdhb1Q91Y08 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
Pcdhb1Q91Y08 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Pcdhb1Q91Y08 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb1Q91Y08 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb1Q91Y08 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb1Q91Y08 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb1Q91Y08 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb1Q91Y08 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb1Q91Y08 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb1Q91Y08 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhb1Q91Y08 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb1Q91Y08 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.57■■□□□ 1.04
Pcdhb1Q91Y08 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.57■■□□□ 1.04
Pcdhb1Q91Y08 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Pcdhb1Q91Y08 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb1Q91Y08 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Pcdhb1Q91Y08 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb1Q91Y08 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Pcdhb1Q91Y08 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
Pcdhb1Q91Y08 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb1Q91Y08 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb1Q91Y08 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.56■■□□□ 1.04
Pcdhb1Q91Y08 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb1Q91Y08 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb1Q91Y08 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.55■■□□□ 1.04
Pcdhb1Q91Y08 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb1Q91Y08 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb1Q91Y08 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.55■■□□□ 1.04
Pcdhb1Q91Y08 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb1Q91Y08 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Pcdhb1Q91Y08 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb1Q91Y08 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.55■■□□□ 1.04
Pcdhb1Q91Y08 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb1Q91Y08 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb1Q91Y08 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.54■■□□□ 1.04
Pcdhb1Q91Y08 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb1Q91Y08 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb1Q91Y08 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Pcdhb1Q91Y08 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.54■■□□□ 1.04
Pcdhb1Q91Y08 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms