Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgb5Q91XX5 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.67■□□□□ 0.9
Pcdhgb5Q91XX5 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.67■□□□□ 0.9
Pcdhgb5Q91XX5 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgb5Q91XX5 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Pcdhgb5Q91XX5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgb5Q91XX5 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgb5Q91XX5 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Pcdhgb5Q91XX5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Pcdhgb5Q91XX5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhgb5Q91XX5 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhgb5Q91XX5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhgb5Q91XX5 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhgb5Q91XX5 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.66■□□□□ 0.9
Pcdhgb5Q91XX5 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.66■□□□□ 0.9
Pcdhgb5Q91XX5 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb5Q91XX5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb5Q91XX5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Pcdhgb5Q91XX5 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb5Q91XX5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Pcdhgb5Q91XX5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb5Q91XX5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb5Q91XX5 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhgb5Q91XX5 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhgb5Q91XX5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhgb5Q91XX5 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.64■□□□□ 0.89
Pcdhgb5Q91XX5 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhgb5Q91XX5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgb5Q91XX5 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhgb5Q91XX5 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhgb5Q91XX5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Pcdhgb5Q91XX5 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgb5Q91XX5 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.63■□□□□ 0.89
Pcdhgb5Q91XX5 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgb5Q91XX5 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Pcdhgb5Q91XX5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.63■□□□□ 0.89
Pcdhgb5Q91XX5 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.63■□□□□ 0.89
Pcdhgb5Q91XX5 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhgb5Q91XX5 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgb5Q91XX5 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgb5Q91XX5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgb5Q91XX5 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgb5Q91XX5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Pcdhgb5Q91XX5 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhgb5Q91XX5 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhgb5Q91XX5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhgb5Q91XX5 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhgb5Q91XX5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhgb5Q91XX5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgb5Q91XX5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgb5Q91XX5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.61■□□□□ 0.89
Pcdhgb5Q91XX5 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgb5Q91XX5 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
Pcdhgb5Q91XX5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgb5Q91XX5 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Pcdhgb5Q91XX5 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgb5Q91XX5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pcdhgb5Q91XX5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgb5Q91XX5 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgb5Q91XX5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgb5Q91XX5 Gm7143-201ENSMUST00000222811 859 ntBASIC20.6■□□□□ 0.89
Pcdhgb5Q91XX5 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgb5Q91XX5 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgb5Q91XX5 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgb5Q91XX5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Pcdhgb5Q91XX5 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Pcdhgb5Q91XX5 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Pcdhgb5Q91XX5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Pcdhgb5Q91XX5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Pcdhgb5Q91XX5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhgb5Q91XX5 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Pcdhgb5Q91XX5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.58■□□□□ 0.89
Pcdhgb5Q91XX5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Pcdhgb5Q91XX5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Pcdhgb5Q91XX5 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Pcdhgb5Q91XX5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.58■□□□□ 0.89
Pcdhgb5Q91XX5 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Pcdhgb5Q91XX5 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.58■□□□□ 0.89
Pcdhgb5Q91XX5 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.58■□□□□ 0.89
Pcdhgb5Q91XX5 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhgb5Q91XX5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhgb5Q91XX5 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.57■□□□□ 0.88
Pcdhgb5Q91XX5 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.57■□□□□ 0.88
Pcdhgb5Q91XX5 Gm43137-201ENSMUST00000198052 594 ntBASIC20.57■□□□□ 0.88
Pcdhgb5Q91XX5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgb5Q91XX5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgb5Q91XX5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgb5Q91XX5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgb5Q91XX5 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Pcdhgb5Q91XX5 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgb5Q91XX5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.56■□□□□ 0.88
Pcdhgb5Q91XX5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgb5Q91XX5 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgb5Q91XX5 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Pcdhgb5Q91XX5 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.56■□□□□ 0.88
Pcdhgb5Q91XX5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.56■□□□□ 0.88
Pcdhgb5Q91XX5 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgb5Q91XX5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgb5Q91XX5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgb5Q91XX5 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms