Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vsx1Q91V10 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.63■□□□□ 0.89
Vsx1Q91V10 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vsx1Q91V10 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vsx1Q91V10 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vsx1Q91V10 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vsx1Q91V10 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vsx1Q91V10 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vsx1Q91V10 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.62■□□□□ 0.89
Vsx1Q91V10 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vsx1Q91V10 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vsx1Q91V10 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Vsx1Q91V10 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vsx1Q91V10 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Vsx1Q91V10 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vsx1Q91V10 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.61■□□□□ 0.89
Vsx1Q91V10 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Vsx1Q91V10 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vsx1Q91V10 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vsx1Q91V10 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vsx1Q91V10 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.6■□□□□ 0.89
Vsx1Q91V10 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vsx1Q91V10 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vsx1Q91V10 Gm8493-201ENSMUST00000196881 489 ntBASIC20.6■□□□□ 0.89
Vsx1Q91V10 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.6■□□□□ 0.89
Vsx1Q91V10 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vsx1Q91V10 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vsx1Q91V10 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.6■□□□□ 0.89
Vsx1Q91V10 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vsx1Q91V10 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vsx1Q91V10 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vsx1Q91V10 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Vsx1Q91V10 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vsx1Q91V10 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vsx1Q91V10 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.59■□□□□ 0.89
Vsx1Q91V10 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Vsx1Q91V10 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.59■□□□□ 0.89
Vsx1Q91V10 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vsx1Q91V10 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vsx1Q91V10 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.59■□□□□ 0.89
Vsx1Q91V10 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vsx1Q91V10 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vsx1Q91V10 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vsx1Q91V10 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.58■□□□□ 0.89
Vsx1Q91V10 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vsx1Q91V10 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vsx1Q91V10 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vsx1Q91V10 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vsx1Q91V10 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.58■□□□□ 0.89
Vsx1Q91V10 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vsx1Q91V10 Gm9870-201ENSMUST00000063874 645 ntBASIC20.58■□□□□ 0.89
Vsx1Q91V10 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vsx1Q91V10 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vsx1Q91V10 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Vsx1Q91V10 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vsx1Q91V10 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vsx1Q91V10 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Vsx1Q91V10 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vsx1Q91V10 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vsx1Q91V10 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vsx1Q91V10 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vsx1Q91V10 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Vsx1Q91V10 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vsx1Q91V10 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vsx1Q91V10 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vsx1Q91V10 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vsx1Q91V10 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vsx1Q91V10 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vsx1Q91V10 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.56■□□□□ 0.88
Vsx1Q91V10 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.56■□□□□ 0.88
Vsx1Q91V10 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.56■□□□□ 0.88
Vsx1Q91V10 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vsx1Q91V10 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vsx1Q91V10 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Vsx1Q91V10 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Vsx1Q91V10 Gm26571-201ENSMUST00000181399 666 ntBASIC20.55■□□□□ 0.88
Vsx1Q91V10 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vsx1Q91V10 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Vsx1Q91V10 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vsx1Q91V10 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vsx1Q91V10 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vsx1Q91V10 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Vsx1Q91V10 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.54■□□□□ 0.88
Vsx1Q91V10 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vsx1Q91V10 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vsx1Q91V10 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Vsx1Q91V10 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vsx1Q91V10 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vsx1Q91V10 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vsx1Q91V10 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Vsx1Q91V10 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vsx1Q91V10 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vsx1Q91V10 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Vsx1Q91V10 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vsx1Q91V10 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Vsx1Q91V10 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vsx1Q91V10 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Vsx1Q91V10 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vsx1Q91V10 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vsx1Q91V10 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms