Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Slf1Q8R3P9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Slf1Q8R3P9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Slf1Q8R3P9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slf1Q8R3P9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Slf1Q8R3P9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slf1Q8R3P9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slf1Q8R3P9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slf1Q8R3P9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Slf1Q8R3P9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slf1Q8R3P9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
Slf1Q8R3P9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slf1Q8R3P9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slf1Q8R3P9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slf1Q8R3P9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slf1Q8R3P9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.88■□□□□ 0.93
Slf1Q8R3P9 Gm16437-201ENSMUST00000025669 507 ntBASIC20.88■□□□□ 0.93
Slf1Q8R3P9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slf1Q8R3P9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slf1Q8R3P9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Slf1Q8R3P9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slf1Q8R3P9 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.87■□□□□ 0.93
Slf1Q8R3P9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slf1Q8R3P9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slf1Q8R3P9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Slf1Q8R3P9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slf1Q8R3P9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slf1Q8R3P9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Slf1Q8R3P9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slf1Q8R3P9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Slf1Q8R3P9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Slf1Q8R3P9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slf1Q8R3P9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slf1Q8R3P9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slf1Q8R3P9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Slf1Q8R3P9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slf1Q8R3P9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slf1Q8R3P9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.85■□□□□ 0.93
Slf1Q8R3P9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slf1Q8R3P9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slf1Q8R3P9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slf1Q8R3P9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slf1Q8R3P9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Slf1Q8R3P9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slf1Q8R3P9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slf1Q8R3P9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Slf1Q8R3P9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Slf1Q8R3P9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.84■□□□□ 0.93
Slf1Q8R3P9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slf1Q8R3P9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Slf1Q8R3P9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slf1Q8R3P9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slf1Q8R3P9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slf1Q8R3P9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.83■□□□□ 0.93
Slf1Q8R3P9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slf1Q8R3P9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Slf1Q8R3P9 Gm11687-201ENSMUST00000118911 886 ntBASIC20.83■□□□□ 0.93
Slf1Q8R3P9 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.83■□□□□ 0.93
Slf1Q8R3P9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Slf1Q8R3P9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slf1Q8R3P9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slf1Q8R3P9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slf1Q8R3P9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slf1Q8R3P9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slf1Q8R3P9 Gm44428-201ENSMUST00000204474 874 ntBASIC20.82■□□□□ 0.92
Slf1Q8R3P9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Slf1Q8R3P9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.82■□□□□ 0.92
Slf1Q8R3P9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slf1Q8R3P9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slf1Q8R3P9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Slf1Q8R3P9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slf1Q8R3P9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slf1Q8R3P9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slf1Q8R3P9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Slf1Q8R3P9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slf1Q8R3P9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.8■□□□□ 0.92
Slf1Q8R3P9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slf1Q8R3P9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slf1Q8R3P9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Slf1Q8R3P9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slf1Q8R3P9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slf1Q8R3P9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slf1Q8R3P9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Slf1Q8R3P9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slf1Q8R3P9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slf1Q8R3P9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slf1Q8R3P9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slf1Q8R3P9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.78■□□□□ 0.92
Slf1Q8R3P9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.78■□□□□ 0.92
Slf1Q8R3P9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
Slf1Q8R3P9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slf1Q8R3P9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slf1Q8R3P9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slf1Q8R3P9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.77■□□□□ 0.92
Slf1Q8R3P9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slf1Q8R3P9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slf1Q8R3P9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.77■□□□□ 0.92
Slf1Q8R3P9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slf1Q8R3P9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Slf1Q8R3P9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms