Protein–RNA interactions for Protein: Q8K3P5

Cnot6, CCR4-NOT transcription complex subunit 6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot6Q8K3P5 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cnot6Q8K3P5 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.29■□□□□ 0.84
Cnot6Q8K3P5 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cnot6Q8K3P5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cnot6Q8K3P5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cnot6Q8K3P5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cnot6Q8K3P5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cnot6Q8K3P5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cnot6Q8K3P5 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cnot6Q8K3P5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cnot6Q8K3P5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.28■□□□□ 0.84
Cnot6Q8K3P5 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.28■□□□□ 0.84
Cnot6Q8K3P5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cnot6Q8K3P5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.28■□□□□ 0.84
Cnot6Q8K3P5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cnot6Q8K3P5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.28■□□□□ 0.84
Cnot6Q8K3P5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cnot6Q8K3P5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cnot6Q8K3P5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cnot6Q8K3P5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cnot6Q8K3P5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cnot6Q8K3P5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cnot6Q8K3P5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cnot6Q8K3P5 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Cnot6Q8K3P5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cnot6Q8K3P5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cnot6Q8K3P5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cnot6Q8K3P5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cnot6Q8K3P5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cnot6Q8K3P5 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cnot6Q8K3P5 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cnot6Q8K3P5 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cnot6Q8K3P5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cnot6Q8K3P5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cnot6Q8K3P5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Cnot6Q8K3P5 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cnot6Q8K3P5 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cnot6Q8K3P5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cnot6Q8K3P5 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.25■□□□□ 0.83
Cnot6Q8K3P5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cnot6Q8K3P5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Cnot6Q8K3P5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cnot6Q8K3P5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnot6Q8K3P5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cnot6Q8K3P5 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cnot6Q8K3P5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cnot6Q8K3P5 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnot6Q8K3P5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cnot6Q8K3P5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cnot6Q8K3P5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Cnot6Q8K3P5 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cnot6Q8K3P5 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnot6Q8K3P5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.23■□□□□ 0.83
Cnot6Q8K3P5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Cnot6Q8K3P5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cnot6Q8K3P5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cnot6Q8K3P5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.23■□□□□ 0.83
Cnot6Q8K3P5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.23■□□□□ 0.83
Cnot6Q8K3P5 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cnot6Q8K3P5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cnot6Q8K3P5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cnot6Q8K3P5 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Cnot6Q8K3P5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cnot6Q8K3P5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cnot6Q8K3P5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cnot6Q8K3P5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Cnot6Q8K3P5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cnot6Q8K3P5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cnot6Q8K3P5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.22■□□□□ 0.83
Cnot6Q8K3P5 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cnot6Q8K3P5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Cnot6Q8K3P5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cnot6Q8K3P5 Golph3-202ENSMUST00000226517 2359 ntBASIC20.22■□□□□ 0.83
Cnot6Q8K3P5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cnot6Q8K3P5 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cnot6Q8K3P5 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cnot6Q8K3P5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cnot6Q8K3P5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cnot6Q8K3P5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cnot6Q8K3P5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cnot6Q8K3P5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cnot6Q8K3P5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Cnot6Q8K3P5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cnot6Q8K3P5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cnot6Q8K3P5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Cnot6Q8K3P5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cnot6Q8K3P5 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cnot6Q8K3P5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cnot6Q8K3P5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cnot6Q8K3P5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cnot6Q8K3P5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cnot6Q8K3P5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cnot6Q8K3P5 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cnot6Q8K3P5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cnot6Q8K3P5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cnot6Q8K3P5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cnot6Q8K3P5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cnot6Q8K3P5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cnot6Q8K3P5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cnot6Q8K3P5 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms