Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
Cchcr1Q8K2I2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cchcr1Q8K2I2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Cchcr1Q8K2I2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cchcr1Q8K2I2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Cchcr1Q8K2I2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Cchcr1Q8K2I2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC24.59■■□□□ 1.53
Cchcr1Q8K2I2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cchcr1Q8K2I2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Cchcr1Q8K2I2 Gm8093-201ENSMUST00000128935 1892 ntBASIC24.59■■□□□ 1.53
Cchcr1Q8K2I2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Cchcr1Q8K2I2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Cchcr1Q8K2I2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cchcr1Q8K2I2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Cchcr1Q8K2I2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Cchcr1Q8K2I2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Cchcr1Q8K2I2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Cchcr1Q8K2I2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Cchcr1Q8K2I2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Cchcr1Q8K2I2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
Cchcr1Q8K2I2 Cap2-205ENSMUST00000225824 1634 ntBASIC24.57■■□□□ 1.52
Cchcr1Q8K2I2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC24.57■■□□□ 1.52
Cchcr1Q8K2I2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Cchcr1Q8K2I2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Cchcr1Q8K2I2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Cchcr1Q8K2I2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Cchcr1Q8K2I2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.57■■□□□ 1.52
Cchcr1Q8K2I2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Cchcr1Q8K2I2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
Cchcr1Q8K2I2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cchcr1Q8K2I2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cchcr1Q8K2I2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Cchcr1Q8K2I2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
Cchcr1Q8K2I2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC24.56■■□□□ 1.52
Cchcr1Q8K2I2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Cchcr1Q8K2I2 Nsd1-203ENSMUST00000224156 1149 ntBASIC24.56■■□□□ 1.52
Cchcr1Q8K2I2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cchcr1Q8K2I2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cchcr1Q8K2I2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cchcr1Q8K2I2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cchcr1Q8K2I2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cchcr1Q8K2I2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC24.55■■□□□ 1.52
Cchcr1Q8K2I2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cchcr1Q8K2I2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cchcr1Q8K2I2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cchcr1Q8K2I2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cchcr1Q8K2I2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cchcr1Q8K2I2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cchcr1Q8K2I2 Gm45444-201ENSMUST00000211394 898 ntBASIC24.53■■□□□ 1.52
Cchcr1Q8K2I2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC24.53■■□□□ 1.52
Cchcr1Q8K2I2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cchcr1Q8K2I2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
Cchcr1Q8K2I2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cchcr1Q8K2I2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cchcr1Q8K2I2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Cchcr1Q8K2I2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cchcr1Q8K2I2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
Cchcr1Q8K2I2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Cchcr1Q8K2I2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC24.52■■□□□ 1.52
Cchcr1Q8K2I2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC24.52■■□□□ 1.52
Cchcr1Q8K2I2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Cchcr1Q8K2I2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC24.52■■□□□ 1.52
Cchcr1Q8K2I2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cchcr1Q8K2I2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cchcr1Q8K2I2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cchcr1Q8K2I2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Cchcr1Q8K2I2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Cchcr1Q8K2I2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC24.51■■□□□ 1.51
Cchcr1Q8K2I2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cchcr1Q8K2I2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC24.51■■□□□ 1.51
Cchcr1Q8K2I2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC24.51■■□□□ 1.51
Cchcr1Q8K2I2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC24.51■■□□□ 1.51
Cchcr1Q8K2I2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cchcr1Q8K2I2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Cchcr1Q8K2I2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cchcr1Q8K2I2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
Cchcr1Q8K2I2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Cchcr1Q8K2I2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Cchcr1Q8K2I2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cchcr1Q8K2I2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cchcr1Q8K2I2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Cchcr1Q8K2I2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cchcr1Q8K2I2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cchcr1Q8K2I2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cchcr1Q8K2I2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Cchcr1Q8K2I2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cchcr1Q8K2I2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cchcr1Q8K2I2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cchcr1Q8K2I2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cchcr1Q8K2I2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Cchcr1Q8K2I2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Cchcr1Q8K2I2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Cchcr1Q8K2I2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC24.47■■□□□ 1.51
Cchcr1Q8K2I2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cchcr1Q8K2I2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cchcr1Q8K2I2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cchcr1Q8K2I2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cchcr1Q8K2I2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cchcr1Q8K2I2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cchcr1Q8K2I2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms