Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Usp44Q8C2S0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Usp44Q8C2S0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Usp44Q8C2S0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Usp44Q8C2S0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Usp44Q8C2S0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC24.57■■□□□ 1.52
Usp44Q8C2S0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Usp44Q8C2S0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Usp44Q8C2S0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Usp44Q8C2S0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Usp44Q8C2S0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Usp44Q8C2S0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Usp44Q8C2S0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC24.55■■□□□ 1.52
Usp44Q8C2S0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Usp44Q8C2S0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Usp44Q8C2S0 Gm5913-201ENSMUST00000119397 1399 ntBASIC24.54■■□□□ 1.52
Usp44Q8C2S0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Usp44Q8C2S0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC24.54■■□□□ 1.52
Usp44Q8C2S0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Usp44Q8C2S0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC24.54■■□□□ 1.52
Usp44Q8C2S0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC24.53■■□□□ 1.52
Usp44Q8C2S0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Usp44Q8C2S0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Usp44Q8C2S0 AC093043.1-201ENSMUST00000226700 898 ntBASIC24.53■■□□□ 1.52
Usp44Q8C2S0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Usp44Q8C2S0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC24.53■■□□□ 1.52
Usp44Q8C2S0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
Usp44Q8C2S0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Usp44Q8C2S0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Usp44Q8C2S0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Usp44Q8C2S0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC24.52■■□□□ 1.52
Usp44Q8C2S0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC24.52■■□□□ 1.52
Usp44Q8C2S0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Usp44Q8C2S0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Usp44Q8C2S0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Usp44Q8C2S0 Gm9959-201ENSMUST00000068277 390 ntBASIC24.51■■□□□ 1.51
Usp44Q8C2S0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Usp44Q8C2S0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC24.51■■□□□ 1.51
Usp44Q8C2S0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Usp44Q8C2S0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC24.51■■□□□ 1.51
Usp44Q8C2S0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Usp44Q8C2S0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Usp44Q8C2S0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Usp44Q8C2S0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Usp44Q8C2S0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC24.5■■□□□ 1.51
Usp44Q8C2S0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC24.5■■□□□ 1.51
Usp44Q8C2S0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Usp44Q8C2S0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC24.5■■□□□ 1.51
Usp44Q8C2S0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Usp44Q8C2S0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Usp44Q8C2S0 Gm4430-201ENSMUST00000192413 1943 ntBASIC24.49■■□□□ 1.51
Usp44Q8C2S0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Usp44Q8C2S0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Usp44Q8C2S0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Usp44Q8C2S0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24.49■■□□□ 1.51
Usp44Q8C2S0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Usp44Q8C2S0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Usp44Q8C2S0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Usp44Q8C2S0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Usp44Q8C2S0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Usp44Q8C2S0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Usp44Q8C2S0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Usp44Q8C2S0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Usp44Q8C2S0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC24.47■■□□□ 1.51
Usp44Q8C2S0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Usp44Q8C2S0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Usp44Q8C2S0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC24.46■■□□□ 1.51
Usp44Q8C2S0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Usp44Q8C2S0 Gm6277-202ENSMUST00000224036 2779 ntBASIC24.46■■□□□ 1.51
Usp44Q8C2S0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Usp44Q8C2S0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Usp44Q8C2S0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Usp44Q8C2S0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Usp44Q8C2S0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
Usp44Q8C2S0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Usp44Q8C2S0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Usp44Q8C2S0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Usp44Q8C2S0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Usp44Q8C2S0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Usp44Q8C2S0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC24.43■■□□□ 1.5
Usp44Q8C2S0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC24.43■■□□□ 1.5
Usp44Q8C2S0 Gm45102-201ENSMUST00000207427 857 ntBASIC24.43■■□□□ 1.5
Usp44Q8C2S0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Usp44Q8C2S0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Usp44Q8C2S0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Usp44Q8C2S0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Usp44Q8C2S0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Usp44Q8C2S0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Usp44Q8C2S0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Usp44Q8C2S0 Etf1-202ENSMUST00000180351 108 ntBASIC24.41■■□□□ 1.5
Usp44Q8C2S0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Usp44Q8C2S0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Usp44Q8C2S0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Usp44Q8C2S0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Usp44Q8C2S0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC24.41■■□□□ 1.5
Usp44Q8C2S0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Usp44Q8C2S0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC24.4■■□□□ 1.5
Usp44Q8C2S0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Usp44Q8C2S0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Usp44Q8C2S0 Gm7417-201ENSMUST00000192950 473 ntBASIC24.4■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms