Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Trub1Q8C0D0 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.51■■□□□ 1.03
Trub1Q8C0D0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.51■■□□□ 1.03
Trub1Q8C0D0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trub1Q8C0D0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trub1Q8C0D0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
Trub1Q8C0D0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trub1Q8C0D0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trub1Q8C0D0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trub1Q8C0D0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trub1Q8C0D0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trub1Q8C0D0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Trub1Q8C0D0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.5■■□□□ 1.03
Trub1Q8C0D0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Trub1Q8C0D0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.5■■□□□ 1.03
Trub1Q8C0D0 Gm10232-201ENSMUST00000089221 720 ntBASIC21.5■■□□□ 1.03
Trub1Q8C0D0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.5■■□□□ 1.03
Trub1Q8C0D0 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.5■■□□□ 1.03
Trub1Q8C0D0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trub1Q8C0D0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Trub1Q8C0D0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Trub1Q8C0D0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trub1Q8C0D0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trub1Q8C0D0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trub1Q8C0D0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trub1Q8C0D0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trub1Q8C0D0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trub1Q8C0D0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trub1Q8C0D0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.48■■□□□ 1.03
Trub1Q8C0D0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trub1Q8C0D0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Trub1Q8C0D0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trub1Q8C0D0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trub1Q8C0D0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trub1Q8C0D0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trub1Q8C0D0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trub1Q8C0D0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trub1Q8C0D0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.47■■□□□ 1.03
Trub1Q8C0D0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trub1Q8C0D0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Trub1Q8C0D0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trub1Q8C0D0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trub1Q8C0D0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trub1Q8C0D0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trub1Q8C0D0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
Trub1Q8C0D0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trub1Q8C0D0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Trub1Q8C0D0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trub1Q8C0D0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trub1Q8C0D0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trub1Q8C0D0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trub1Q8C0D0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trub1Q8C0D0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
Trub1Q8C0D0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Trub1Q8C0D0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trub1Q8C0D0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Trub1Q8C0D0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trub1Q8C0D0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trub1Q8C0D0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trub1Q8C0D0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trub1Q8C0D0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trub1Q8C0D0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.44■■□□□ 1.02
Trub1Q8C0D0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trub1Q8C0D0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Trub1Q8C0D0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trub1Q8C0D0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Trub1Q8C0D0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trub1Q8C0D0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trub1Q8C0D0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trub1Q8C0D0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.43■■□□□ 1.02
Trub1Q8C0D0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trub1Q8C0D0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.43■■□□□ 1.02
Trub1Q8C0D0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.43■■□□□ 1.02
Trub1Q8C0D0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trub1Q8C0D0 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.43■■□□□ 1.02
Trub1Q8C0D0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.43■■□□□ 1.02
Trub1Q8C0D0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Trub1Q8C0D0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trub1Q8C0D0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Trub1Q8C0D0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.42■■□□□ 1.02
Trub1Q8C0D0 Gm10399-202ENSMUST00000202768 748 ntBASIC21.42■■□□□ 1.02
Trub1Q8C0D0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trub1Q8C0D0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trub1Q8C0D0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trub1Q8C0D0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Trub1Q8C0D0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.41■■□□□ 1.02
Trub1Q8C0D0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trub1Q8C0D0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.41■■□□□ 1.02
Trub1Q8C0D0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.41■■□□□ 1.02
Trub1Q8C0D0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Trub1Q8C0D0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trub1Q8C0D0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trub1Q8C0D0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.41■■□□□ 1.02
Trub1Q8C0D0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trub1Q8C0D0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trub1Q8C0D0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trub1Q8C0D0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.4■■□□□ 1.02
Trub1Q8C0D0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trub1Q8C0D0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trub1Q8C0D0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms