Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Cdk5rap1Q8BTW8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Cdk5rap1Q8BTW8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdk5rap1Q8BTW8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.76■□□□□ 0.75
Cdk5rap1Q8BTW8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.76■□□□□ 0.75
Cdk5rap1Q8BTW8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Cdk5rap1Q8BTW8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdk5rap1Q8BTW8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdk5rap1Q8BTW8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdk5rap1Q8BTW8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdk5rap1Q8BTW8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cdk5rap1Q8BTW8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdk5rap1Q8BTW8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.75■□□□□ 0.75
Cdk5rap1Q8BTW8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cdk5rap1Q8BTW8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdk5rap1Q8BTW8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdk5rap1Q8BTW8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdk5rap1Q8BTW8 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.74■□□□□ 0.75
Cdk5rap1Q8BTW8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.74■□□□□ 0.75
Cdk5rap1Q8BTW8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.74■□□□□ 0.75
Cdk5rap1Q8BTW8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdk5rap1Q8BTW8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdk5rap1Q8BTW8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdk5rap1Q8BTW8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdk5rap1Q8BTW8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdk5rap1Q8BTW8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdk5rap1Q8BTW8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdk5rap1Q8BTW8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk5rap1Q8BTW8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cdk5rap1Q8BTW8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk5rap1Q8BTW8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk5rap1Q8BTW8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cdk5rap1Q8BTW8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk5rap1Q8BTW8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.73■□□□□ 0.75
Cdk5rap1Q8BTW8 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.73■□□□□ 0.75
Cdk5rap1Q8BTW8 Gm9870-201ENSMUST00000063874 645 ntBASIC19.73■□□□□ 0.75
Cdk5rap1Q8BTW8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cdk5rap1Q8BTW8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdk5rap1Q8BTW8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.73■□□□□ 0.75
Cdk5rap1Q8BTW8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Cdk5rap1Q8BTW8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Cdk5rap1Q8BTW8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap1Q8BTW8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap1Q8BTW8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap1Q8BTW8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap1Q8BTW8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap1Q8BTW8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.72■□□□□ 0.75
Cdk5rap1Q8BTW8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap1Q8BTW8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdk5rap1Q8BTW8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdk5rap1Q8BTW8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.71■□□□□ 0.75
Cdk5rap1Q8BTW8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdk5rap1Q8BTW8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdk5rap1Q8BTW8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdk5rap1Q8BTW8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cdk5rap1Q8BTW8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdk5rap1Q8BTW8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdk5rap1Q8BTW8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdk5rap1Q8BTW8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.7■□□□□ 0.74
Cdk5rap1Q8BTW8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Cdk5rap1Q8BTW8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdk5rap1Q8BTW8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cdk5rap1Q8BTW8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdk5rap1Q8BTW8 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.69■□□□□ 0.74
Cdk5rap1Q8BTW8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdk5rap1Q8BTW8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.69■□□□□ 0.74
Cdk5rap1Q8BTW8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Cdk5rap1Q8BTW8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdk5rap1Q8BTW8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdk5rap1Q8BTW8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cdk5rap1Q8BTW8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdk5rap1Q8BTW8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cdk5rap1Q8BTW8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdk5rap1Q8BTW8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cdk5rap1Q8BTW8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdk5rap1Q8BTW8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdk5rap1Q8BTW8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.68■□□□□ 0.74
Cdk5rap1Q8BTW8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdk5rap1Q8BTW8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdk5rap1Q8BTW8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.67■□□□□ 0.74
Cdk5rap1Q8BTW8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
Cdk5rap1Q8BTW8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdk5rap1Q8BTW8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cdk5rap1Q8BTW8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.66■□□□□ 0.74
Cdk5rap1Q8BTW8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.66■□□□□ 0.74
Cdk5rap1Q8BTW8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.66■□□□□ 0.74
Cdk5rap1Q8BTW8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdk5rap1Q8BTW8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdk5rap1Q8BTW8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cdk5rap1Q8BTW8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdk5rap1Q8BTW8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cdk5rap1Q8BTW8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdk5rap1Q8BTW8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdk5rap1Q8BTW8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdk5rap1Q8BTW8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdk5rap1Q8BTW8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdk5rap1Q8BTW8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cdk5rap1Q8BTW8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cdk5rap1Q8BTW8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cdk5rap1Q8BTW8 Gm12821-201ENSMUST00000120022 600 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms