Protein–RNA interactions for Protein: Q8BSM7

Slc43a1, Large neutral amino acids transporter small subunit 3, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc43a1Q8BSM7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc43a1Q8BSM7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc43a1Q8BSM7 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc43a1Q8BSM7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc43a1Q8BSM7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc43a1Q8BSM7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Slc43a1Q8BSM7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc43a1Q8BSM7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc43a1Q8BSM7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc43a1Q8BSM7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.04■□□□□ 0.96
Slc43a1Q8BSM7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.04■□□□□ 0.96
Slc43a1Q8BSM7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc43a1Q8BSM7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.04■□□□□ 0.96
Slc43a1Q8BSM7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc43a1Q8BSM7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc43a1Q8BSM7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.04■□□□□ 0.96
Slc43a1Q8BSM7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc43a1Q8BSM7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc43a1Q8BSM7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc43a1Q8BSM7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.03■□□□□ 0.96
Slc43a1Q8BSM7 Gm7143-201ENSMUST00000222811 859 ntBASIC21.03■□□□□ 0.96
Slc43a1Q8BSM7 Serp2-204ENSMUST00000228055 705 ntBASIC21.03■□□□□ 0.96
Slc43a1Q8BSM7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc43a1Q8BSM7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc43a1Q8BSM7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc43a1Q8BSM7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc43a1Q8BSM7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Slc43a1Q8BSM7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc43a1Q8BSM7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc43a1Q8BSM7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc43a1Q8BSM7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.01■□□□□ 0.95
Slc43a1Q8BSM7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc43a1Q8BSM7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc43a1Q8BSM7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Slc43a1Q8BSM7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc43a1Q8BSM7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc43a1Q8BSM7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc43a1Q8BSM7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc43a1Q8BSM7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Slc43a1Q8BSM7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Slc43a1Q8BSM7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Slc43a1Q8BSM7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21■□□□□ 0.95
Slc43a1Q8BSM7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc43a1Q8BSM7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Slc43a1Q8BSM7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc43a1Q8BSM7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc43a1Q8BSM7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
Slc43a1Q8BSM7 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.99■□□□□ 0.95
Slc43a1Q8BSM7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc43a1Q8BSM7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc43a1Q8BSM7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Slc43a1Q8BSM7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc43a1Q8BSM7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Slc43a1Q8BSM7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc43a1Q8BSM7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Slc43a1Q8BSM7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.98■□□□□ 0.95
Slc43a1Q8BSM7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Slc43a1Q8BSM7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Slc43a1Q8BSM7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc43a1Q8BSM7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc43a1Q8BSM7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc43a1Q8BSM7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Slc43a1Q8BSM7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.97■□□□□ 0.95
Slc43a1Q8BSM7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Slc43a1Q8BSM7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc43a1Q8BSM7 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc43a1Q8BSM7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Slc43a1Q8BSM7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc43a1Q8BSM7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc43a1Q8BSM7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.96■□□□□ 0.95
Slc43a1Q8BSM7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Slc43a1Q8BSM7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.96■□□□□ 0.95
Slc43a1Q8BSM7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc43a1Q8BSM7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Slc43a1Q8BSM7 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Slc43a1Q8BSM7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
Slc43a1Q8BSM7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Slc43a1Q8BSM7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Slc43a1Q8BSM7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Slc43a1Q8BSM7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc43a1Q8BSM7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc43a1Q8BSM7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Slc43a1Q8BSM7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc43a1Q8BSM7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Slc43a1Q8BSM7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc43a1Q8BSM7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc43a1Q8BSM7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.94■□□□□ 0.94
Slc43a1Q8BSM7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc43a1Q8BSM7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Slc43a1Q8BSM7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Slc43a1Q8BSM7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Slc43a1Q8BSM7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.93■□□□□ 0.94
Slc43a1Q8BSM7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Slc43a1Q8BSM7 Gm43137-201ENSMUST00000198052 594 ntBASIC20.93■□□□□ 0.94
Slc43a1Q8BSM7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Slc43a1Q8BSM7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Slc43a1Q8BSM7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc43a1Q8BSM7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc43a1Q8BSM7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc43a1Q8BSM7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms