Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Smg1Q8BKX6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smg1Q8BKX6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smg1Q8BKX6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smg1Q8BKX6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smg1Q8BKX6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smg1Q8BKX6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Smg1Q8BKX6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smg1Q8BKX6 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.96■□□□□ 0.47
Smg1Q8BKX6 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.96■□□□□ 0.47
Smg1Q8BKX6 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.96■□□□□ 0.47
Smg1Q8BKX6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smg1Q8BKX6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smg1Q8BKX6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.96■□□□□ 0.47
Smg1Q8BKX6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.96■□□□□ 0.47
Smg1Q8BKX6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smg1Q8BKX6 Gm12251-201ENSMUST00000117893 792 ntBASIC17.96■□□□□ 0.47
Smg1Q8BKX6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smg1Q8BKX6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smg1Q8BKX6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Smg1Q8BKX6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Smg1Q8BKX6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.94■□□□□ 0.46
Smg1Q8BKX6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.94■□□□□ 0.46
Smg1Q8BKX6 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.94■□□□□ 0.46
Smg1Q8BKX6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Smg1Q8BKX6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smg1Q8BKX6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smg1Q8BKX6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.94■□□□□ 0.46
Smg1Q8BKX6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smg1Q8BKX6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smg1Q8BKX6 Gm10252-201ENSMUST00000209541 832 ntBASIC17.93■□□□□ 0.46
Smg1Q8BKX6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smg1Q8BKX6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smg1Q8BKX6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smg1Q8BKX6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Smg1Q8BKX6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Smg1Q8BKX6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Smg1Q8BKX6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smg1Q8BKX6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smg1Q8BKX6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smg1Q8BKX6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smg1Q8BKX6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smg1Q8BKX6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smg1Q8BKX6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smg1Q8BKX6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smg1Q8BKX6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smg1Q8BKX6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smg1Q8BKX6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smg1Q8BKX6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.92■□□□□ 0.46
Smg1Q8BKX6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.92■□□□□ 0.46
Smg1Q8BKX6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smg1Q8BKX6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Smg1Q8BKX6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.92■□□□□ 0.46
Smg1Q8BKX6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smg1Q8BKX6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smg1Q8BKX6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smg1Q8BKX6 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smg1Q8BKX6 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.91■□□□□ 0.46
Smg1Q8BKX6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Smg1Q8BKX6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smg1Q8BKX6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smg1Q8BKX6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Smg1Q8BKX6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Smg1Q8BKX6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smg1Q8BKX6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.9■□□□□ 0.46
Smg1Q8BKX6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Smg1Q8BKX6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smg1Q8BKX6 Gm26833-201ENSMUST00000180899 440 ntBASIC17.9■□□□□ 0.46
Smg1Q8BKX6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smg1Q8BKX6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smg1Q8BKX6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.89■□□□□ 0.45
Smg1Q8BKX6 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smg1Q8BKX6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.89■□□□□ 0.45
Smg1Q8BKX6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.89■□□□□ 0.45
Smg1Q8BKX6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.89■□□□□ 0.45
Smg1Q8BKX6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smg1Q8BKX6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smg1Q8BKX6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Smg1Q8BKX6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smg1Q8BKX6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.88■□□□□ 0.45
Smg1Q8BKX6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.88■□□□□ 0.45
Smg1Q8BKX6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.88■□□□□ 0.45
Smg1Q8BKX6 Gm43060-201ENSMUST00000200621 289 ntBASIC17.88■□□□□ 0.45
Smg1Q8BKX6 Gm10033-202ENSMUST00000211874 928 ntBASIC17.88■□□□□ 0.45
Smg1Q8BKX6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smg1Q8BKX6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Smg1Q8BKX6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Smg1Q8BKX6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Smg1Q8BKX6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smg1Q8BKX6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Smg1Q8BKX6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smg1Q8BKX6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Smg1Q8BKX6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smg1Q8BKX6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smg1Q8BKX6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.87■□□□□ 0.45
Smg1Q8BKX6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smg1Q8BKX6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smg1Q8BKX6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smg1Q8BKX6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smg1Q8BKX6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 117.9 ms