Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim50Q810I2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Trim50Q810I2 Gm5812-201ENSMUST00000061073 957 ntBASIC20.27■□□□□ 0.84
Trim50Q810I2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim50Q810I2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.27■□□□□ 0.83
Trim50Q810I2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Trim50Q810I2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Trim50Q810I2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Trim50Q810I2 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.26■□□□□ 0.83
Trim50Q810I2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Trim50Q810I2 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.26■□□□□ 0.83
Trim50Q810I2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim50Q810I2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim50Q810I2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim50Q810I2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.25■□□□□ 0.83
Trim50Q810I2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.25■□□□□ 0.83
Trim50Q810I2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim50Q810I2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim50Q810I2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim50Q810I2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim50Q810I2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.25■□□□□ 0.83
Trim50Q810I2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim50Q810I2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Trim50Q810I2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.25■□□□□ 0.83
Trim50Q810I2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim50Q810I2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim50Q810I2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.24■□□□□ 0.83
Trim50Q810I2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Trim50Q810I2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim50Q810I2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim50Q810I2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Trim50Q810I2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim50Q810I2 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.23■□□□□ 0.83
Trim50Q810I2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.23■□□□□ 0.83
Trim50Q810I2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim50Q810I2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim50Q810I2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim50Q810I2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Trim50Q810I2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Trim50Q810I2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim50Q810I2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.22■□□□□ 0.83
Trim50Q810I2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim50Q810I2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim50Q810I2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim50Q810I2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim50Q810I2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.21■□□□□ 0.83
Trim50Q810I2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim50Q810I2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim50Q810I2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim50Q810I2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim50Q810I2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim50Q810I2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.2■□□□□ 0.82
Trim50Q810I2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim50Q810I2 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.2■□□□□ 0.82
Trim50Q810I2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim50Q810I2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim50Q810I2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.2■□□□□ 0.82
Trim50Q810I2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim50Q810I2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim50Q810I2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Trim50Q810I2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim50Q810I2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.19■□□□□ 0.82
Trim50Q810I2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.19■□□□□ 0.82
Trim50Q810I2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim50Q810I2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Trim50Q810I2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim50Q810I2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim50Q810I2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.19■□□□□ 0.82
Trim50Q810I2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim50Q810I2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim50Q810I2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim50Q810I2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim50Q810I2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim50Q810I2 Gm15820-201ENSMUST00000201566 728 ntBASIC20.18■□□□□ 0.82
Trim50Q810I2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim50Q810I2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim50Q810I2 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.18■□□□□ 0.82
Trim50Q810I2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim50Q810I2 Gm15546-201ENSMUST00000122095 826 ntBASIC20.17■□□□□ 0.82
Trim50Q810I2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.17■□□□□ 0.82
Trim50Q810I2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim50Q810I2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim50Q810I2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim50Q810I2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim50Q810I2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.16■□□□□ 0.82
Trim50Q810I2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim50Q810I2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
Trim50Q810I2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.16■□□□□ 0.82
Trim50Q810I2 Gm10399-202ENSMUST00000202768 748 ntBASIC20.16■□□□□ 0.82
Trim50Q810I2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.16■□□□□ 0.82
Trim50Q810I2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim50Q810I2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim50Q810I2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim50Q810I2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim50Q810I2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim50Q810I2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim50Q810I2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim50Q810I2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim50Q810I2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim50Q810I2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms