Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc116Q80X53 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc116Q80X53 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
Ccdc116Q80X53 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Ccdc116Q80X53 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc116Q80X53 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Ccdc116Q80X53 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Ccdc116Q80X53 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc116Q80X53 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Ccdc116Q80X53 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc116Q80X53 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc116Q80X53 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc116Q80X53 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc116Q80X53 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc116Q80X53 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc116Q80X53 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc116Q80X53 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc116Q80X53 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc116Q80X53 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc116Q80X53 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc116Q80X53 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.37■□□□□ 0.85
Ccdc116Q80X53 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ccdc116Q80X53 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc116Q80X53 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.37■□□□□ 0.85
Ccdc116Q80X53 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ccdc116Q80X53 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc116Q80X53 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.36■□□□□ 0.85
Ccdc116Q80X53 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Ccdc116Q80X53 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc116Q80X53 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc116Q80X53 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc116Q80X53 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc116Q80X53 Gm5921-201ENSMUST00000075898 882 ntBASIC20.36■□□□□ 0.85
Ccdc116Q80X53 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Ccdc116Q80X53 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc116Q80X53 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc116Q80X53 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc116Q80X53 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc116Q80X53 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc116Q80X53 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc116Q80X53 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc116Q80X53 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc116Q80X53 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc116Q80X53 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ccdc116Q80X53 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc116Q80X53 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.35■□□□□ 0.85
Ccdc116Q80X53 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc116Q80X53 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc116Q80X53 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc116Q80X53 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc116Q80X53 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Ccdc116Q80X53 Gm43566-201ENSMUST00000196851 808 ntBASIC20.34■□□□□ 0.85
Ccdc116Q80X53 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.34■□□□□ 0.85
Ccdc116Q80X53 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Ccdc116Q80X53 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc116Q80X53 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc116Q80X53 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc116Q80X53 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc116Q80X53 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc116Q80X53 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc116Q80X53 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Ccdc116Q80X53 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.33■□□□□ 0.85
Ccdc116Q80X53 Notumos-201ENSMUST00000151998 2659 ntBASIC20.33■□□□□ 0.84
Ccdc116Q80X53 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Ccdc116Q80X53 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Ccdc116Q80X53 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc116Q80X53 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc116Q80X53 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc116Q80X53 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc116Q80X53 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc116Q80X53 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.32■□□□□ 0.84
Ccdc116Q80X53 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc116Q80X53 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.32■□□□□ 0.84
Ccdc116Q80X53 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc116Q80X53 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc116Q80X53 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc116Q80X53 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc116Q80X53 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
Ccdc116Q80X53 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc116Q80X53 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc116Q80X53 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.31■□□□□ 0.84
Ccdc116Q80X53 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ccdc116Q80X53 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc116Q80X53 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc116Q80X53 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.3■□□□□ 0.84
Ccdc116Q80X53 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.3■□□□□ 0.84
Ccdc116Q80X53 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc116Q80X53 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc116Q80X53 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc116Q80X53 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc116Q80X53 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc116Q80X53 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.29■□□□□ 0.84
Ccdc116Q80X53 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc116Q80X53 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc116Q80X53 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc116Q80X53 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ccdc116Q80X53 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc116Q80X53 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc116Q80X53 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc116Q80X53 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms