Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx4Q7TNK1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx4Q7TNK1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx4Q7TNK1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx4Q7TNK1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx4Q7TNK1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rfx4Q7TNK1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx4Q7TNK1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.9■□□□□ 0.78
Rfx4Q7TNK1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.9■□□□□ 0.78
Rfx4Q7TNK1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx4Q7TNK1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx4Q7TNK1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx4Q7TNK1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx4Q7TNK1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx4Q7TNK1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx4Q7TNK1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx4Q7TNK1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx4Q7TNK1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx4Q7TNK1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx4Q7TNK1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
Rfx4Q7TNK1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rfx4Q7TNK1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfx4Q7TNK1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.89■□□□□ 0.77
Rfx4Q7TNK1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfx4Q7TNK1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfx4Q7TNK1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfx4Q7TNK1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfx4Q7TNK1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx4Q7TNK1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx4Q7TNK1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx4Q7TNK1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx4Q7TNK1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rfx4Q7TNK1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx4Q7TNK1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx4Q7TNK1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rfx4Q7TNK1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rfx4Q7TNK1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx4Q7TNK1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx4Q7TNK1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rfx4Q7TNK1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx4Q7TNK1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rfx4Q7TNK1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx4Q7TNK1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx4Q7TNK1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx4Q7TNK1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx4Q7TNK1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx4Q7TNK1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Rfx4Q7TNK1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx4Q7TNK1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx4Q7TNK1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx4Q7TNK1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Rfx4Q7TNK1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx4Q7TNK1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx4Q7TNK1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx4Q7TNK1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.85■□□□□ 0.77
Rfx4Q7TNK1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rfx4Q7TNK1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.85■□□□□ 0.77
Rfx4Q7TNK1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rfx4Q7TNK1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx4Q7TNK1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rfx4Q7TNK1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx4Q7TNK1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx4Q7TNK1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Rfx4Q7TNK1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx4Q7TNK1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx4Q7TNK1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx4Q7TNK1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx4Q7TNK1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.84■□□□□ 0.77
Rfx4Q7TNK1 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.84■□□□□ 0.77
Rfx4Q7TNK1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx4Q7TNK1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx4Q7TNK1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx4Q7TNK1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx4Q7TNK1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.84■□□□□ 0.77
Rfx4Q7TNK1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx4Q7TNK1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx4Q7TNK1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rfx4Q7TNK1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfx4Q7TNK1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfx4Q7TNK1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Rfx4Q7TNK1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfx4Q7TNK1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.83■□□□□ 0.76
Rfx4Q7TNK1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx4Q7TNK1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx4Q7TNK1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx4Q7TNK1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx4Q7TNK1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx4Q7TNK1 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.82■□□□□ 0.76
Rfx4Q7TNK1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx4Q7TNK1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx4Q7TNK1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx4Q7TNK1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.82■□□□□ 0.76
Rfx4Q7TNK1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx4Q7TNK1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx4Q7TNK1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx4Q7TNK1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Rfx4Q7TNK1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx4Q7TNK1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Rfx4Q7TNK1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx4Q7TNK1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms