Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Scn10aQ6QIY3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Scn10aQ6QIY3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Scn10aQ6QIY3 Gm7291-201ENSMUST00000199147 382 ntBASIC24.25■■□□□ 1.47
Scn10aQ6QIY3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Scn10aQ6QIY3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Scn10aQ6QIY3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Scn10aQ6QIY3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Scn10aQ6QIY3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Scn10aQ6QIY3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Scn10aQ6QIY3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Scn10aQ6QIY3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Scn10aQ6QIY3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
Scn10aQ6QIY3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Scn10aQ6QIY3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC24.23■■□□□ 1.47
Scn10aQ6QIY3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Scn10aQ6QIY3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Scn10aQ6QIY3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Scn10aQ6QIY3 Gm10493-201ENSMUST00000097270 612 ntBASIC24.22■■□□□ 1.47
Scn10aQ6QIY3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Scn10aQ6QIY3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Scn10aQ6QIY3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Scn10aQ6QIY3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Scn10aQ6QIY3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Scn10aQ6QIY3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC24.2■■□□□ 1.46
Scn10aQ6QIY3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Scn10aQ6QIY3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Scn10aQ6QIY3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Scn10aQ6QIY3 Gm6085-201ENSMUST00000182774 1470 ntBASIC24.2■■□□□ 1.46
Scn10aQ6QIY3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Scn10aQ6QIY3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Scn10aQ6QIY3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Scn10aQ6QIY3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC24.19■■□□□ 1.46
Scn10aQ6QIY3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Scn10aQ6QIY3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Scn10aQ6QIY3 Gm26833-201ENSMUST00000180899 440 ntBASIC24.19■■□□□ 1.46
Scn10aQ6QIY3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Scn10aQ6QIY3 Gm43530-201ENSMUST00000195920 274 ntBASIC24.19■■□□□ 1.46
Scn10aQ6QIY3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Scn10aQ6QIY3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Scn10aQ6QIY3 Gm7160-202ENSMUST00000188519 1027 ntBASIC24.18■■□□□ 1.46
Scn10aQ6QIY3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC24.18■■□□□ 1.46
Scn10aQ6QIY3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC24.18■■□□□ 1.46
Scn10aQ6QIY3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
Scn10aQ6QIY3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Scn10aQ6QIY3 Gm27405-201ENSMUST00000184201 112 ntBASIC24.17■■□□□ 1.46
Scn10aQ6QIY3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Scn10aQ6QIY3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Scn10aQ6QIY3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Scn10aQ6QIY3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Scn10aQ6QIY3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Scn10aQ6QIY3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Scn10aQ6QIY3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Scn10aQ6QIY3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC24.16■■□□□ 1.46
Scn10aQ6QIY3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Scn10aQ6QIY3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Scn10aQ6QIY3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC24.15■■□□□ 1.46
Scn10aQ6QIY3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC24.15■■□□□ 1.46
Scn10aQ6QIY3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Scn10aQ6QIY3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Scn10aQ6QIY3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC24.15■■□□□ 1.46
Scn10aQ6QIY3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Scn10aQ6QIY3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Scn10aQ6QIY3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC24.14■■□□□ 1.46
Scn10aQ6QIY3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Scn10aQ6QIY3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
Scn10aQ6QIY3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
Scn10aQ6QIY3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Scn10aQ6QIY3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Scn10aQ6QIY3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Scn10aQ6QIY3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Scn10aQ6QIY3 Gm10129-202ENSMUST00000193100 1316 ntBASIC24.13■■□□□ 1.45
Scn10aQ6QIY3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC24.13■■□□□ 1.45
Scn10aQ6QIY3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC24.13■■□□□ 1.45
Scn10aQ6QIY3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Scn10aQ6QIY3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
Scn10aQ6QIY3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Scn10aQ6QIY3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Scn10aQ6QIY3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Scn10aQ6QIY3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC24.12■■□□□ 1.45
Scn10aQ6QIY3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC24.12■■□□□ 1.45
Scn10aQ6QIY3 Gm37179-201ENSMUST00000194862 823 ntBASIC24.12■■□□□ 1.45
Scn10aQ6QIY3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC24.12■■□□□ 1.45
Scn10aQ6QIY3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Scn10aQ6QIY3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Scn10aQ6QIY3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Scn10aQ6QIY3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
Scn10aQ6QIY3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Scn10aQ6QIY3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Scn10aQ6QIY3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Scn10aQ6QIY3 AC099934.2-201ENSMUST00000196389 70 ntBASIC24.11■■□□□ 1.45
Scn10aQ6QIY3 AC156953.1-201ENSMUST00000196953 70 ntBASIC24.11■■□□□ 1.45
Scn10aQ6QIY3 AC157822.2-201ENSMUST00000200291 70 ntBASIC24.11■■□□□ 1.45
Scn10aQ6QIY3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC24.11■■□□□ 1.45
Scn10aQ6QIY3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Scn10aQ6QIY3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Scn10aQ6QIY3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Scn10aQ6QIY3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Scn10aQ6QIY3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Scn10aQ6QIY3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 165 ms