Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Snrnp40Q6PE01 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Snrnp40Q6PE01 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Snrnp40Q6PE01 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Snrnp40Q6PE01 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Snrnp40Q6PE01 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Snrnp40Q6PE01 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Snrnp40Q6PE01 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Snrnp40Q6PE01 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Snrnp40Q6PE01 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Snrnp40Q6PE01 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Snrnp40Q6PE01 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Snrnp40Q6PE01 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Snrnp40Q6PE01 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.45■□□□□ 0.54
Snrnp40Q6PE01 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Snrnp40Q6PE01 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Snrnp40Q6PE01 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Snrnp40Q6PE01 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Snrnp40Q6PE01 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Snrnp40Q6PE01 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snrnp40Q6PE01 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snrnp40Q6PE01 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Snrnp40Q6PE01 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.44■□□□□ 0.54
Snrnp40Q6PE01 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snrnp40Q6PE01 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.44■□□□□ 0.54
Snrnp40Q6PE01 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Snrnp40Q6PE01 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snrnp40Q6PE01 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Snrnp40Q6PE01 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Snrnp40Q6PE01 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Snrnp40Q6PE01 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Snrnp40Q6PE01 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Snrnp40Q6PE01 Gm12251-201ENSMUST00000117893 792 ntBASIC18.43■□□□□ 0.54
Snrnp40Q6PE01 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.43■□□□□ 0.54
Snrnp40Q6PE01 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Snrnp40Q6PE01 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Snrnp40Q6PE01 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp40Q6PE01 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp40Q6PE01 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.42■□□□□ 0.54
Snrnp40Q6PE01 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.42■□□□□ 0.54
Snrnp40Q6PE01 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp40Q6PE01 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Snrnp40Q6PE01 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Snrnp40Q6PE01 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp40Q6PE01 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Snrnp40Q6PE01 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp40Q6PE01 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp40Q6PE01 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Snrnp40Q6PE01 Gm7291-201ENSMUST00000199147 382 ntBASIC18.41■□□□□ 0.54
Snrnp40Q6PE01 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Snrnp40Q6PE01 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.41■□□□□ 0.54
Snrnp40Q6PE01 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Snrnp40Q6PE01 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Snrnp40Q6PE01 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Snrnp40Q6PE01 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.4■□□□□ 0.54
Snrnp40Q6PE01 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snrnp40Q6PE01 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Snrnp40Q6PE01 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Snrnp40Q6PE01 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snrnp40Q6PE01 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snrnp40Q6PE01 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.54
Snrnp40Q6PE01 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snrnp40Q6PE01 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.39■□□□□ 0.53
Snrnp40Q6PE01 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snrnp40Q6PE01 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snrnp40Q6PE01 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snrnp40Q6PE01 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snrnp40Q6PE01 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snrnp40Q6PE01 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Snrnp40Q6PE01 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snrnp40Q6PE01 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Snrnp40Q6PE01 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Snrnp40Q6PE01 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Snrnp40Q6PE01 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Snrnp40Q6PE01 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Snrnp40Q6PE01 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.38■□□□□ 0.53
Snrnp40Q6PE01 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Snrnp40Q6PE01 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Snrnp40Q6PE01 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp40Q6PE01 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp40Q6PE01 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp40Q6PE01 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp40Q6PE01 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Snrnp40Q6PE01 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Snrnp40Q6PE01 Gm26833-201ENSMUST00000180899 440 ntBASIC18.37■□□□□ 0.53
Snrnp40Q6PE01 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.37■□□□□ 0.53
Snrnp40Q6PE01 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp40Q6PE01 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp40Q6PE01 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Snrnp40Q6PE01 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Snrnp40Q6PE01 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Snrnp40Q6PE01 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Snrnp40Q6PE01 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.36■□□□□ 0.53
Snrnp40Q6PE01 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Snrnp40Q6PE01 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Snrnp40Q6PE01 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.36■□□□□ 0.53
Snrnp40Q6PE01 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Snrnp40Q6PE01 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Snrnp40Q6PE01 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Snrnp40Q6PE01 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms