Protein–RNA interactions for Protein: Q6PDM4

Ccdc36, Interactor of HORMAD1 protein 1, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc36Q6PDM4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc36Q6PDM4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc36Q6PDM4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.56■□□□□ 0.4
Ccdc36Q6PDM4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc36Q6PDM4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc36Q6PDM4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc36Q6PDM4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc36Q6PDM4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc36Q6PDM4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc36Q6PDM4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc36Q6PDM4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc36Q6PDM4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc36Q6PDM4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.55■□□□□ 0.4
Ccdc36Q6PDM4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc36Q6PDM4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc36Q6PDM4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc36Q6PDM4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc36Q6PDM4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ccdc36Q6PDM4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc36Q6PDM4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc36Q6PDM4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc36Q6PDM4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc36Q6PDM4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc36Q6PDM4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc36Q6PDM4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc36Q6PDM4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc36Q6PDM4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc36Q6PDM4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.53■□□□□ 0.4
Ccdc36Q6PDM4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc36Q6PDM4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc36Q6PDM4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc36Q6PDM4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc36Q6PDM4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.53■□□□□ 0.4
Ccdc36Q6PDM4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ccdc36Q6PDM4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc36Q6PDM4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc36Q6PDM4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc36Q6PDM4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc36Q6PDM4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc36Q6PDM4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc36Q6PDM4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc36Q6PDM4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccdc36Q6PDM4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ccdc36Q6PDM4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc36Q6PDM4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc36Q6PDM4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc36Q6PDM4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc36Q6PDM4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc36Q6PDM4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc36Q6PDM4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc36Q6PDM4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ccdc36Q6PDM4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ccdc36Q6PDM4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.5■□□□□ 0.39
Ccdc36Q6PDM4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc36Q6PDM4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc36Q6PDM4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.5■□□□□ 0.39
Ccdc36Q6PDM4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc36Q6PDM4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc36Q6PDM4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ccdc36Q6PDM4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc36Q6PDM4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc36Q6PDM4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc36Q6PDM4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc36Q6PDM4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc36Q6PDM4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc36Q6PDM4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.49■□□□□ 0.39
Ccdc36Q6PDM4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.49■□□□□ 0.39
Ccdc36Q6PDM4 Mir6538-201ENSMUST00000183713 110 ntBASIC17.49■□□□□ 0.39
Ccdc36Q6PDM4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc36Q6PDM4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc36Q6PDM4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.49■□□□□ 0.39
Ccdc36Q6PDM4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc36Q6PDM4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc36Q6PDM4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.49■□□□□ 0.39
Ccdc36Q6PDM4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ccdc36Q6PDM4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc36Q6PDM4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc36Q6PDM4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc36Q6PDM4 Gm11175-201ENSMUST00000116172 543 ntBASIC17.48■□□□□ 0.39
Ccdc36Q6PDM4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
Ccdc36Q6PDM4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc36Q6PDM4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc36Q6PDM4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc36Q6PDM4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc36Q6PDM4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc36Q6PDM4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ccdc36Q6PDM4 Gm44428-201ENSMUST00000204474 874 ntBASIC17.47■□□□□ 0.39
Ccdc36Q6PDM4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.47■□□□□ 0.39
Ccdc36Q6PDM4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc36Q6PDM4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc36Q6PDM4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc36Q6PDM4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.46■□□□□ 0.39
Ccdc36Q6PDM4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc36Q6PDM4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc36Q6PDM4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc36Q6PDM4 Golph3-202ENSMUST00000226517 2359 ntBASIC17.46■□□□□ 0.39
Ccdc36Q6PDM4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ccdc36Q6PDM4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc36Q6PDM4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc36Q6PDM4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms