Protein–RNA interactions for Protein: Q6PDC0

Rundc3b, RUN domain-containing protein 3B, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3bQ6PDC0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rundc3bQ6PDC0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rundc3bQ6PDC0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rundc3bQ6PDC0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rundc3bQ6PDC0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.52■□□□□ 0.72
Rundc3bQ6PDC0 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.52■□□□□ 0.72
Rundc3bQ6PDC0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Rundc3bQ6PDC0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rundc3bQ6PDC0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rundc3bQ6PDC0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rundc3bQ6PDC0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rundc3bQ6PDC0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rundc3bQ6PDC0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rundc3bQ6PDC0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rundc3bQ6PDC0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rundc3bQ6PDC0 Mir3960-201ENSMUST00000198213 73 ntBASIC19.51■□□□□ 0.71
Rundc3bQ6PDC0 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.51■□□□□ 0.71
Rundc3bQ6PDC0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rundc3bQ6PDC0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rundc3bQ6PDC0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rundc3bQ6PDC0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Rundc3bQ6PDC0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Rundc3bQ6PDC0 Golph3-202ENSMUST00000226517 2359 ntBASIC19.5■□□□□ 0.71
Rundc3bQ6PDC0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rundc3bQ6PDC0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rundc3bQ6PDC0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rundc3bQ6PDC0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rundc3bQ6PDC0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rundc3bQ6PDC0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rundc3bQ6PDC0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rundc3bQ6PDC0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Rundc3bQ6PDC0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rundc3bQ6PDC0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rundc3bQ6PDC0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rundc3bQ6PDC0 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.49■□□□□ 0.71
Rundc3bQ6PDC0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rundc3bQ6PDC0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Rundc3bQ6PDC0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rundc3bQ6PDC0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rundc3bQ6PDC0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rundc3bQ6PDC0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rundc3bQ6PDC0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Rundc3bQ6PDC0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rundc3bQ6PDC0 Gm6821-201ENSMUST00000107540 542 ntBASIC19.48■□□□□ 0.71
Rundc3bQ6PDC0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rundc3bQ6PDC0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rundc3bQ6PDC0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.48■□□□□ 0.71
Rundc3bQ6PDC0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rundc3bQ6PDC0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rundc3bQ6PDC0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.47■□□□□ 0.71
Rundc3bQ6PDC0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Rundc3bQ6PDC0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Rundc3bQ6PDC0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rundc3bQ6PDC0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rundc3bQ6PDC0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
Rundc3bQ6PDC0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rundc3bQ6PDC0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rundc3bQ6PDC0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.46■□□□□ 0.71
Rundc3bQ6PDC0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rundc3bQ6PDC0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rundc3bQ6PDC0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rundc3bQ6PDC0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rundc3bQ6PDC0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rundc3bQ6PDC0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
Rundc3bQ6PDC0 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.45■□□□□ 0.7
Rundc3bQ6PDC0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rundc3bQ6PDC0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.45■□□□□ 0.7
Rundc3bQ6PDC0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rundc3bQ6PDC0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.44■□□□□ 0.7
Rundc3bQ6PDC0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rundc3bQ6PDC0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rundc3bQ6PDC0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rundc3bQ6PDC0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rundc3bQ6PDC0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rundc3bQ6PDC0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Rundc3bQ6PDC0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rundc3bQ6PDC0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rundc3bQ6PDC0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rundc3bQ6PDC0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rundc3bQ6PDC0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rundc3bQ6PDC0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rundc3bQ6PDC0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rundc3bQ6PDC0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Rundc3bQ6PDC0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rundc3bQ6PDC0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.42■□□□□ 0.7
Rundc3bQ6PDC0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rundc3bQ6PDC0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Rundc3bQ6PDC0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rundc3bQ6PDC0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rundc3bQ6PDC0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
Rundc3bQ6PDC0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.42■□□□□ 0.7
Rundc3bQ6PDC0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rundc3bQ6PDC0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rundc3bQ6PDC0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rundc3bQ6PDC0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rundc3bQ6PDC0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rundc3bQ6PDC0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.42■□□□□ 0.7
Rundc3bQ6PDC0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.42■□□□□ 0.7
Rundc3bQ6PDC0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rundc3bQ6PDC0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms