Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhga7Q6DD96 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhga7Q6DD96 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Pcdhga7Q6DD96 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Pcdhga7Q6DD96 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhga7Q6DD96 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Pcdhga7Q6DD96 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.1■□□□□ 0.81
Pcdhga7Q6DD96 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhga7Q6DD96 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhga7Q6DD96 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhga7Q6DD96 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhga7Q6DD96 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhga7Q6DD96 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhga7Q6DD96 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhga7Q6DD96 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhga7Q6DD96 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhga7Q6DD96 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhga7Q6DD96 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.08■□□□□ 0.81
Pcdhga7Q6DD96 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.08■□□□□ 0.81
Pcdhga7Q6DD96 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhga7Q6DD96 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhga7Q6DD96 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Pcdhga7Q6DD96 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhga7Q6DD96 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhga7Q6DD96 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhga7Q6DD96 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhga7Q6DD96 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhga7Q6DD96 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhga7Q6DD96 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhga7Q6DD96 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhga7Q6DD96 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.07■□□□□ 0.8
Pcdhga7Q6DD96 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhga7Q6DD96 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhga7Q6DD96 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhga7Q6DD96 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhga7Q6DD96 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.06■□□□□ 0.8
Pcdhga7Q6DD96 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhga7Q6DD96 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhga7Q6DD96 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhga7Q6DD96 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhga7Q6DD96 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhga7Q6DD96 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhga7Q6DD96 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdhga7Q6DD96 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.05■□□□□ 0.8
Pcdhga7Q6DD96 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhga7Q6DD96 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhga7Q6DD96 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhga7Q6DD96 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhga7Q6DD96 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhga7Q6DD96 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhga7Q6DD96 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhga7Q6DD96 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pcdhga7Q6DD96 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.03■□□□□ 0.8
Pcdhga7Q6DD96 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhga7Q6DD96 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.03■□□□□ 0.8
Pcdhga7Q6DD96 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhga7Q6DD96 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pcdhga7Q6DD96 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhga7Q6DD96 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhga7Q6DD96 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhga7Q6DD96 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.02■□□□□ 0.8
Pcdhga7Q6DD96 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhga7Q6DD96 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhga7Q6DD96 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhga7Q6DD96 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhga7Q6DD96 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhga7Q6DD96 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhga7Q6DD96 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhga7Q6DD96 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhga7Q6DD96 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.01■□□□□ 0.79
Pcdhga7Q6DD96 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhga7Q6DD96 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
Pcdhga7Q6DD96 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Pcdhga7Q6DD96 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Pcdhga7Q6DD96 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhga7Q6DD96 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhga7Q6DD96 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Pcdhga7Q6DD96 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20■□□□□ 0.79
Pcdhga7Q6DD96 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhga7Q6DD96 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Pcdhga7Q6DD96 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhga7Q6DD96 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20■□□□□ 0.79
Pcdhga7Q6DD96 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20■□□□□ 0.79
Pcdhga7Q6DD96 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhga7Q6DD96 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhga7Q6DD96 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhga7Q6DD96 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhga7Q6DD96 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Pcdhga7Q6DD96 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.99■□□□□ 0.79
Pcdhga7Q6DD96 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.99■□□□□ 0.79
Pcdhga7Q6DD96 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhga7Q6DD96 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhga7Q6DD96 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhga7Q6DD96 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhga7Q6DD96 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhga7Q6DD96 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.99■□□□□ 0.79
Pcdhga7Q6DD96 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhga7Q6DD96 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhga7Q6DD96 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.99■□□□□ 0.79
Pcdhga7Q6DD96 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms