Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Ptch1Q61115 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Ptch1Q61115 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
Ptch1Q61115 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
Ptch1Q61115 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Ptch1Q61115 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Ptch1Q61115 Gm4430-201ENSMUST00000192413 1943 ntBASIC30.89■■■□□ 2.54
Ptch1Q61115 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Ptch1Q61115 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC30.89■■■□□ 2.54
Ptch1Q61115 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Ptch1Q61115 Gm40848-201ENSMUST00000221998 324 ntBASIC30.88■■■□□ 2.53
Ptch1Q61115 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
Ptch1Q61115 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
Ptch1Q61115 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
Ptch1Q61115 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Ptch1Q61115 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Ptch1Q61115 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC30.87■■■□□ 2.53
Ptch1Q61115 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Ptch1Q61115 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Ptch1Q61115 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Ptch1Q61115 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Ptch1Q61115 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
Ptch1Q61115 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Ptch1Q61115 Gm7143-201ENSMUST00000222811 859 ntBASIC30.85■■■□□ 2.53
Ptch1Q61115 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Ptch1Q61115 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Ptch1Q61115 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Ptch1Q61115 Gm7160-202ENSMUST00000188519 1027 ntBASIC30.84■■■□□ 2.53
Ptch1Q61115 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Ptch1Q61115 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Ptch1Q61115 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Ptch1Q61115 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Ptch1Q61115 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Ptch1Q61115 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Ptch1Q61115 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Ptch1Q61115 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC30.81■■■□□ 2.52
Ptch1Q61115 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Ptch1Q61115 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
Ptch1Q61115 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Ptch1Q61115 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC30.81■■■□□ 2.52
Ptch1Q61115 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC30.81■■■□□ 2.52
Ptch1Q61115 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Ptch1Q61115 Gm10033-202ENSMUST00000211874 928 ntBASIC30.8■■■□□ 2.52
Ptch1Q61115 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Ptch1Q61115 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC30.79■■■□□ 2.52
Ptch1Q61115 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC30.79■■■□□ 2.52
Ptch1Q61115 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Ptch1Q61115 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC30.78■■■□□ 2.52
Ptch1Q61115 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Ptch1Q61115 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Ptch1Q61115 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Ptch1Q61115 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC30.78■■■□□ 2.52
Ptch1Q61115 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ptch1Q61115 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ptch1Q61115 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC30.77■■■□□ 2.52
Ptch1Q61115 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Ptch1Q61115 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ptch1Q61115 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ptch1Q61115 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ptch1Q61115 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.52
Ptch1Q61115 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC30.76■■■□□ 2.51
Ptch1Q61115 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Ptch1Q61115 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Ptch1Q61115 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC30.75■■■□□ 2.51
Ptch1Q61115 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Ptch1Q61115 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Ptch1Q61115 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Ptch1Q61115 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Ptch1Q61115 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
Ptch1Q61115 Gm12669-201ENSMUST00000122162 1009 ntBASIC30.73■■■□□ 2.51
Ptch1Q61115 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ptch1Q61115 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Ptch1Q61115 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ptch1Q61115 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
Ptch1Q61115 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC30.73■■■□□ 2.51
Ptch1Q61115 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ptch1Q61115 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC30.73■■■□□ 2.51
Ptch1Q61115 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC30.73■■■□□ 2.51
Ptch1Q61115 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ptch1Q61115 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC30.73■■■□□ 2.51
Ptch1Q61115 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ptch1Q61115 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
Ptch1Q61115 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Ptch1Q61115 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Ptch1Q61115 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Ptch1Q61115 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
Ptch1Q61115 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Ptch1Q61115 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
Ptch1Q61115 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC30.7■■■□□ 2.51
Ptch1Q61115 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC30.7■■■□□ 2.51
Ptch1Q61115 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Ptch1Q61115 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
Ptch1Q61115 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC30.69■■■□□ 2.5
Ptch1Q61115 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Ptch1Q61115 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Ptch1Q61115 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC30.68■■■□□ 2.5
Ptch1Q61115 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC30.67■■■□□ 2.5
Ptch1Q61115 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
Ptch1Q61115 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Ptch1Q61115 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms