Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Foxd3Q61060 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Foxd3Q61060 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Foxd3Q61060 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Foxd3Q61060 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Foxd3Q61060 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Foxd3Q61060 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Foxd3Q61060 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Foxd3Q61060 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Foxd3Q61060 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Foxd3Q61060 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Foxd3Q61060 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Foxd3Q61060 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Foxd3Q61060 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Foxd3Q61060 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Foxd3Q61060 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Foxd3Q61060 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Foxd3Q61060 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Foxd3Q61060 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Foxd3Q61060 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Foxd3Q61060 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Foxd3Q61060 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Foxd3Q61060 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Foxd3Q61060 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Foxd3Q61060 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.92■□□□□ 0.62
Foxd3Q61060 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Foxd3Q61060 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Foxd3Q61060 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Foxd3Q61060 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
Foxd3Q61060 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Foxd3Q61060 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Foxd3Q61060 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Foxd3Q61060 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Foxd3Q61060 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.91■□□□□ 0.62
Foxd3Q61060 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Foxd3Q61060 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Foxd3Q61060 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Foxd3Q61060 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Foxd3Q61060 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Foxd3Q61060 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Foxd3Q61060 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Foxd3Q61060 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.91■□□□□ 0.62
Foxd3Q61060 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Foxd3Q61060 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Foxd3Q61060 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Foxd3Q61060 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Foxd3Q61060 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxd3Q61060 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.9■□□□□ 0.62
Foxd3Q61060 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Foxd3Q61060 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.9■□□□□ 0.62
Foxd3Q61060 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.9■□□□□ 0.62
Foxd3Q61060 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxd3Q61060 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxd3Q61060 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.9■□□□□ 0.62
Foxd3Q61060 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxd3Q61060 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.9■□□□□ 0.62
Foxd3Q61060 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxd3Q61060 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Foxd3Q61060 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Foxd3Q61060 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Foxd3Q61060 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Foxd3Q61060 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Foxd3Q61060 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Foxd3Q61060 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Foxd3Q61060 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.88■□□□□ 0.61
Foxd3Q61060 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Foxd3Q61060 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
Foxd3Q61060 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Foxd3Q61060 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.88■□□□□ 0.61
Foxd3Q61060 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.88■□□□□ 0.61
Foxd3Q61060 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.88■□□□□ 0.61
Foxd3Q61060 Rps24-207ENSMUST00000224568 714 ntBASIC18.88■□□□□ 0.61
Foxd3Q61060 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Foxd3Q61060 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.88■□□□□ 0.61
Foxd3Q61060 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Foxd3Q61060 Gm14117-201ENSMUST00000122417 843 ntBASIC18.87■□□□□ 0.61
Foxd3Q61060 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Foxd3Q61060 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.87■□□□□ 0.61
Foxd3Q61060 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Foxd3Q61060 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.87■□□□□ 0.61
Foxd3Q61060 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Foxd3Q61060 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Foxd3Q61060 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.86■□□□□ 0.61
Foxd3Q61060 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.86■□□□□ 0.61
Foxd3Q61060 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Foxd3Q61060 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Foxd3Q61060 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Foxd3Q61060 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Foxd3Q61060 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.86■□□□□ 0.61
Foxd3Q61060 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Foxd3Q61060 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.85■□□□□ 0.61
Foxd3Q61060 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Foxd3Q61060 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Foxd3Q61060 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Foxd3Q61060 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Foxd3Q61060 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.85■□□□□ 0.61
Foxd3Q61060 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.85■□□□□ 0.61
Foxd3Q61060 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
Foxd3Q61060 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Foxd3Q61060 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms