Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.12■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.12■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.11■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15-1-dv6-1Q5R1D2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.07■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.07■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.07■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.07■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.06■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.06■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.05■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms