Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Rnf20Q5DTM8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Rnf20Q5DTM8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
Rnf20Q5DTM8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Rnf20Q5DTM8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Rnf20Q5DTM8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Rnf20Q5DTM8 Gm5913-201ENSMUST00000119397 1399 ntBASIC24.77■■□□□ 1.56
Rnf20Q5DTM8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Rnf20Q5DTM8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Rnf20Q5DTM8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Rnf20Q5DTM8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rnf20Q5DTM8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Rnf20Q5DTM8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC24.76■■□□□ 1.55
Rnf20Q5DTM8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC24.76■■□□□ 1.55
Rnf20Q5DTM8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rnf20Q5DTM8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rnf20Q5DTM8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rnf20Q5DTM8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Rnf20Q5DTM8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
Rnf20Q5DTM8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
Rnf20Q5DTM8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Rnf20Q5DTM8 Gm10232-201ENSMUST00000089221 720 ntBASIC24.74■■□□□ 1.55
Rnf20Q5DTM8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rnf20Q5DTM8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
Rnf20Q5DTM8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rnf20Q5DTM8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
Rnf20Q5DTM8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC24.73■■□□□ 1.55
Rnf20Q5DTM8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
Rnf20Q5DTM8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rnf20Q5DTM8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rnf20Q5DTM8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
Rnf20Q5DTM8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
Rnf20Q5DTM8 Gm6277-202ENSMUST00000224036 2779 ntBASIC24.73■■□□□ 1.55
Rnf20Q5DTM8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Rnf20Q5DTM8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
Rnf20Q5DTM8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Rnf20Q5DTM8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Rnf20Q5DTM8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Rnf20Q5DTM8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Rnf20Q5DTM8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC24.72■■□□□ 1.55
Rnf20Q5DTM8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC24.72■■□□□ 1.55
Rnf20Q5DTM8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC24.72■■□□□ 1.55
Rnf20Q5DTM8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC24.72■■□□□ 1.55
Rnf20Q5DTM8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Rnf20Q5DTM8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Rnf20Q5DTM8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Rnf20Q5DTM8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Rnf20Q5DTM8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
Rnf20Q5DTM8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC24.71■■□□□ 1.55
Rnf20Q5DTM8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rnf20Q5DTM8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rnf20Q5DTM8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rnf20Q5DTM8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rnf20Q5DTM8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rnf20Q5DTM8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rnf20Q5DTM8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rnf20Q5DTM8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rnf20Q5DTM8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC24.71■■□□□ 1.55
Rnf20Q5DTM8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC24.7■■□□□ 1.54
Rnf20Q5DTM8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC24.7■■□□□ 1.54
Rnf20Q5DTM8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Rnf20Q5DTM8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Rnf20Q5DTM8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Rnf20Q5DTM8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rnf20Q5DTM8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Rnf20Q5DTM8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC24.69■■□□□ 1.54
Rnf20Q5DTM8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rnf20Q5DTM8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Rnf20Q5DTM8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rnf20Q5DTM8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Rnf20Q5DTM8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Rnf20Q5DTM8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Rnf20Q5DTM8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC24.68■■□□□ 1.54
Rnf20Q5DTM8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
Rnf20Q5DTM8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Rnf20Q5DTM8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Rnf20Q5DTM8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
Rnf20Q5DTM8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Rnf20Q5DTM8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Rnf20Q5DTM8 Gm10399-202ENSMUST00000202768 748 ntBASIC24.67■■□□□ 1.54
Rnf20Q5DTM8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC24.67■■□□□ 1.54
Rnf20Q5DTM8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Rnf20Q5DTM8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Rnf20Q5DTM8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Rnf20Q5DTM8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Rnf20Q5DTM8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Rnf20Q5DTM8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Rnf20Q5DTM8 Gm10620-201ENSMUST00000098379 1332 ntBASIC24.65■■□□□ 1.54
Rnf20Q5DTM8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.65■■□□□ 1.54
Rnf20Q5DTM8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rnf20Q5DTM8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Rnf20Q5DTM8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
Rnf20Q5DTM8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Rnf20Q5DTM8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Rnf20Q5DTM8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Rnf20Q5DTM8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Rnf20Q5DTM8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Rnf20Q5DTM8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC24.63■■□□□ 1.53
Rnf20Q5DTM8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Rnf20Q5DTM8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms