Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Cks1brtQ3UNC9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cks1brtQ3UNC9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cks1brtQ3UNC9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cks1brtQ3UNC9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cks1brtQ3UNC9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cks1brtQ3UNC9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cks1brtQ3UNC9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cks1brtQ3UNC9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cks1brtQ3UNC9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cks1brtQ3UNC9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cks1brtQ3UNC9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cks1brtQ3UNC9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cks1brtQ3UNC9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cks1brtQ3UNC9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cks1brtQ3UNC9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cks1brtQ3UNC9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cks1brtQ3UNC9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cks1brtQ3UNC9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cks1brtQ3UNC9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cks1brtQ3UNC9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cks1brtQ3UNC9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Cks1brtQ3UNC9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cks1brtQ3UNC9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cks1brtQ3UNC9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cks1brtQ3UNC9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cks1brtQ3UNC9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.02□□□□□ -0.01
Cks1brtQ3UNC9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cks1brtQ3UNC9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cks1brtQ3UNC9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cks1brtQ3UNC9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cks1brtQ3UNC9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cks1brtQ3UNC9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cks1brtQ3UNC9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cks1brtQ3UNC9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cks1brtQ3UNC9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cks1brtQ3UNC9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cks1brtQ3UNC9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Cks1brtQ3UNC9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cks1brtQ3UNC9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cks1brtQ3UNC9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cks1brtQ3UNC9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cks1brtQ3UNC9 Gm34220-201ENSMUST00000223001 2709 ntBASIC15□□□□□ -0.01
Cks1brtQ3UNC9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cks1brtQ3UNC9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cks1brtQ3UNC9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cks1brtQ3UNC9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cks1brtQ3UNC9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cks1brtQ3UNC9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cks1brtQ3UNC9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cks1brtQ3UNC9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cks1brtQ3UNC9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC14.99□□□□□ -0.01
Cks1brtQ3UNC9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cks1brtQ3UNC9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cks1brtQ3UNC9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cks1brtQ3UNC9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cks1brtQ3UNC9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cks1brtQ3UNC9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cks1brtQ3UNC9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cks1brtQ3UNC9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cks1brtQ3UNC9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Cks1brtQ3UNC9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC14.98□□□□□ -0.01
Cks1brtQ3UNC9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cks1brtQ3UNC9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cks1brtQ3UNC9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cks1brtQ3UNC9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cks1brtQ3UNC9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cks1brtQ3UNC9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cks1brtQ3UNC9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cks1brtQ3UNC9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cks1brtQ3UNC9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cks1brtQ3UNC9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cks1brtQ3UNC9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cks1brtQ3UNC9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cks1brtQ3UNC9 Gm22567-201ENSMUST00000175542 342 ntBASIC14.97□□□□□ -0.01
Cks1brtQ3UNC9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cks1brtQ3UNC9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cks1brtQ3UNC9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cks1brtQ3UNC9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cks1brtQ3UNC9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cks1brtQ3UNC9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cks1brtQ3UNC9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cks1brtQ3UNC9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cks1brtQ3UNC9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cks1brtQ3UNC9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cks1brtQ3UNC9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cks1brtQ3UNC9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cks1brtQ3UNC9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Cks1brtQ3UNC9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cks1brtQ3UNC9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Cks1brtQ3UNC9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cks1brtQ3UNC9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cks1brtQ3UNC9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cks1brtQ3UNC9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Cks1brtQ3UNC9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Cks1brtQ3UNC9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cks1brtQ3UNC9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cks1brtQ3UNC9 Gm42418-201ENSMUST00000182010 1831 ntBASIC14.94□□□□□ -0.02
Cks1brtQ3UNC9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cks1brtQ3UNC9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 1594.4 ms