Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.96■□□□□ 0.79
Ptchd3Q0EEE2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ptchd3Q0EEE2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ptchd3Q0EEE2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ptchd3Q0EEE2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ptchd3Q0EEE2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptchd3Q0EEE2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptchd3Q0EEE2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptchd3Q0EEE2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ptchd3Q0EEE2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ptchd3Q0EEE2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ptchd3Q0EEE2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ptchd3Q0EEE2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ptchd3Q0EEE2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ptchd3Q0EEE2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ptchd3Q0EEE2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ptchd3Q0EEE2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ptchd3Q0EEE2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ptchd3Q0EEE2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ptchd3Q0EEE2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ptchd3Q0EEE2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ptchd3Q0EEE2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ptchd3Q0EEE2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ptchd3Q0EEE2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ptchd3Q0EEE2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ptchd3Q0EEE2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ptchd3Q0EEE2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ptchd3Q0EEE2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ptchd3Q0EEE2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ptchd3Q0EEE2 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.93■□□□□ 0.78
Ptchd3Q0EEE2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ptchd3Q0EEE2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ptchd3Q0EEE2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ptchd3Q0EEE2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ptchd3Q0EEE2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ptchd3Q0EEE2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ptchd3Q0EEE2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ptchd3Q0EEE2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ptchd3Q0EEE2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ptchd3Q0EEE2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ptchd3Q0EEE2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Ptchd3Q0EEE2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ptchd3Q0EEE2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ptchd3Q0EEE2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ptchd3Q0EEE2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ptchd3Q0EEE2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ptchd3Q0EEE2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Ptchd3Q0EEE2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ptchd3Q0EEE2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ptchd3Q0EEE2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ptchd3Q0EEE2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Ptchd3Q0EEE2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Ptchd3Q0EEE2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ptchd3Q0EEE2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.9■□□□□ 0.78
Ptchd3Q0EEE2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ptchd3Q0EEE2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ptchd3Q0EEE2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ptchd3Q0EEE2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ptchd3Q0EEE2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ptchd3Q0EEE2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ptchd3Q0EEE2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.89■□□□□ 0.77
Ptchd3Q0EEE2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ptchd3Q0EEE2 Cap2-205ENSMUST00000225824 1634 ntBASIC19.89■□□□□ 0.77
Ptchd3Q0EEE2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ptchd3Q0EEE2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ptchd3Q0EEE2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ptchd3Q0EEE2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ptchd3Q0EEE2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ptchd3Q0EEE2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ptchd3Q0EEE2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ptchd3Q0EEE2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ptchd3Q0EEE2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ptchd3Q0EEE2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ptchd3Q0EEE2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ptchd3Q0EEE2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ptchd3Q0EEE2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ptchd3Q0EEE2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ptchd3Q0EEE2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ptchd3Q0EEE2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ptchd3Q0EEE2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ptchd3Q0EEE2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ptchd3Q0EEE2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.87■□□□□ 0.77
Ptchd3Q0EEE2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ptchd3Q0EEE2 Golph3-202ENSMUST00000226517 2359 ntBASIC19.87■□□□□ 0.77
Ptchd3Q0EEE2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ptchd3Q0EEE2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Ptchd3Q0EEE2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ptchd3Q0EEE2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ptchd3Q0EEE2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ptchd3Q0EEE2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.86■□□□□ 0.77
Ptchd3Q0EEE2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ptchd3Q0EEE2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ptchd3Q0EEE2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ptchd3Q0EEE2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ptchd3Q0EEE2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ptchd3Q0EEE2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ptchd3Q0EEE2 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.85■□□□□ 0.77
Ptchd3Q0EEE2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ptchd3Q0EEE2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ptchd3Q0EEE2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms