Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd8Q09XV5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Chd8Q09XV5 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chd8Q09XV5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chd8Q09XV5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd8Q09XV5 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.22■□□□□ 0.67
Chd8Q09XV5 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.21■□□□□ 0.67
Chd8Q09XV5 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Chd8Q09XV5 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Chd8Q09XV5 Gm18101-201ENSMUST00000215769 548 ntBASIC19.21■□□□□ 0.67
Chd8Q09XV5 Gm10812-201ENSMUST00000099864 546 ntBASIC19.21■□□□□ 0.67
Chd8Q09XV5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd8Q09XV5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd8Q09XV5 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.21■□□□□ 0.67
Chd8Q09XV5 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Chd8Q09XV5 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.66
Chd8Q09XV5 Smad6-203ENSMUST00000179458 273 ntBASIC19.2■□□□□ 0.66
Chd8Q09XV5 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd8Q09XV5 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd8Q09XV5 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chd8Q09XV5 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chd8Q09XV5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Chd8Q09XV5 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd8Q09XV5 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Chd8Q09XV5 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chd8Q09XV5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.19■□□□□ 0.66
Chd8Q09XV5 Gm13168-201ENSMUST00000121771 632 ntBASIC19.19■□□□□ 0.66
Chd8Q09XV5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd8Q09XV5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Chd8Q09XV5 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd8Q09XV5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chd8Q09XV5 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.19■□□□□ 0.66
Chd8Q09XV5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd8Q09XV5 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chd8Q09XV5 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chd8Q09XV5 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.18■□□□□ 0.66
Chd8Q09XV5 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chd8Q09XV5 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd8Q09XV5 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.17■□□□□ 0.66
Chd8Q09XV5 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.17■□□□□ 0.66
Chd8Q09XV5 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.17■□□□□ 0.66
Chd8Q09XV5 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chd8Q09XV5 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd8Q09XV5 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.17■□□□□ 0.66
Chd8Q09XV5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chd8Q09XV5 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.17■□□□□ 0.66
Chd8Q09XV5 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd8Q09XV5 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.16■□□□□ 0.66
Chd8Q09XV5 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Chd8Q09XV5 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.16■□□□□ 0.66
Chd8Q09XV5 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.16■□□□□ 0.66
Chd8Q09XV5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.16■□□□□ 0.66
Chd8Q09XV5 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd8Q09XV5 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Chd8Q09XV5 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.15■□□□□ 0.66
Chd8Q09XV5 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.15■□□□□ 0.66
Chd8Q09XV5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.15■□□□□ 0.66
Chd8Q09XV5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chd8Q09XV5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chd8Q09XV5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.15■□□□□ 0.66
Chd8Q09XV5 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.15■□□□□ 0.66
Chd8Q09XV5 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd8Q09XV5 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.14■□□□□ 0.65
Chd8Q09XV5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd8Q09XV5 Gm21362-201ENSMUST00000194272 928 ntBASIC19.14■□□□□ 0.65
Chd8Q09XV5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chd8Q09XV5 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chd8Q09XV5 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chd8Q09XV5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chd8Q09XV5 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chd8Q09XV5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chd8Q09XV5 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.13■□□□□ 0.65
Chd8Q09XV5 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd8Q09XV5 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.12■□□□□ 0.65
Chd8Q09XV5 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.12■□□□□ 0.65
Chd8Q09XV5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.12■□□□□ 0.65
Chd8Q09XV5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Chd8Q09XV5 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Chd8Q09XV5 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Chd8Q09XV5 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Chd8Q09XV5 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chd8Q09XV5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd8Q09XV5 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Chd8Q09XV5 Gm20049-201ENSMUST00000219950 730 ntBASIC19.11■□□□□ 0.65
Chd8Q09XV5 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd8Q09XV5 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Chd8Q09XV5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Chd8Q09XV5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd8Q09XV5 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd8Q09XV5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd8Q09XV5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.1■□□□□ 0.65
Chd8Q09XV5 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chd8Q09XV5 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.1■□□□□ 0.65
Chd8Q09XV5 Gm37856-201ENSMUST00000191634 999 ntBASIC19.1■□□□□ 0.65
Chd8Q09XV5 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Chd8Q09XV5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.1■□□□□ 0.65
Chd8Q09XV5 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd8Q09XV5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Chd8Q09XV5 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Chd8Q09XV5 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms