Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm6P62313 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm6P62313 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm6P62313 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm6P62313 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm6P62313 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm6P62313 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
Lsm6P62313 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm6P62313 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm6P62313 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm6P62313 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm6P62313 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm6P62313 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.22■□□□□ 0.51
Lsm6P62313 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm6P62313 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm6P62313 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm6P62313 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm6P62313 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm6P62313 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.22■□□□□ 0.51
Lsm6P62313 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm6P62313 Notumos-201ENSMUST00000151998 2659 ntBASIC18.21■□□□□ 0.51
Lsm6P62313 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm6P62313 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm6P62313 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm6P62313 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.21■□□□□ 0.51
Lsm6P62313 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm6P62313 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm6P62313 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Lsm6P62313 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.2■□□□□ 0.5
Lsm6P62313 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lsm6P62313 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lsm6P62313 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lsm6P62313 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.2■□□□□ 0.5
Lsm6P62313 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm6P62313 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Lsm6P62313 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm6P62313 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm6P62313 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm6P62313 Gm10232-201ENSMUST00000089221 720 ntBASIC18.19■□□□□ 0.5
Lsm6P62313 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Lsm6P62313 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm6P62313 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm6P62313 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm6P62313 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm6P62313 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm6P62313 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm6P62313 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm6P62313 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Lsm6P62313 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.18■□□□□ 0.5
Lsm6P62313 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm6P62313 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Lsm6P62313 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Lsm6P62313 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm6P62313 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Lsm6P62313 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.17■□□□□ 0.5
Lsm6P62313 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.17■□□□□ 0.5
Lsm6P62313 Gm10399-202ENSMUST00000202768 748 ntBASIC18.17■□□□□ 0.5
Lsm6P62313 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm6P62313 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm6P62313 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm6P62313 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm6P62313 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm6P62313 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm6P62313 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm6P62313 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Lsm6P62313 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm6P62313 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm6P62313 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm6P62313 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm6P62313 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm6P62313 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm6P62313 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.15■□□□□ 0.5
Lsm6P62313 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.15■□□□□ 0.5
Lsm6P62313 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm6P62313 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.15■□□□□ 0.5
Lsm6P62313 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.15■□□□□ 0.5
Lsm6P62313 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm6P62313 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm6P62313 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm6P62313 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lsm6P62313 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lsm6P62313 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Lsm6P62313 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Lsm6P62313 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm6P62313 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm6P62313 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Lsm6P62313 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Lsm6P62313 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm6P62313 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm6P62313 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Lsm6P62313 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm6P62313 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm6P62313 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm6P62313 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm6P62313 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm6P62313 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Lsm6P62313 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Lsm6P62313 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Lsm6P62313 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.13■□□□□ 0.49
Lsm6P62313 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms