Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SmoP56726 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SmoP56726 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SmoP56726 Gm12922-201ENSMUST00000120626 809 ntBASIC20.98■□□□□ 0.95
SmoP56726 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.98■□□□□ 0.95
SmoP56726 Gm9847-201ENSMUST00000052528 599 ntBASIC20.98■□□□□ 0.95
SmoP56726 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SmoP56726 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SmoP56726 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SmoP56726 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SmoP56726 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SmoP56726 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SmoP56726 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SmoP56726 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SmoP56726 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SmoP56726 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SmoP56726 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SmoP56726 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.97■□□□□ 0.95
SmoP56726 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SmoP56726 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SmoP56726 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SmoP56726 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SmoP56726 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SmoP56726 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
SmoP56726 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SmoP56726 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SmoP56726 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SmoP56726 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.96■□□□□ 0.95
SmoP56726 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SmoP56726 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.96■□□□□ 0.95
SmoP56726 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SmoP56726 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SmoP56726 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.95■□□□□ 0.94
SmoP56726 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.95■□□□□ 0.94
SmoP56726 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.95■□□□□ 0.94
SmoP56726 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.95■□□□□ 0.94
SmoP56726 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SmoP56726 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SmoP56726 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SmoP56726 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SmoP56726 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.95■□□□□ 0.94
SmoP56726 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.95■□□□□ 0.94
SmoP56726 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SmoP56726 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.95■□□□□ 0.94
SmoP56726 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SmoP56726 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SmoP56726 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SmoP56726 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
SmoP56726 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SmoP56726 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SmoP56726 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
SmoP56726 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.93■□□□□ 0.94
SmoP56726 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SmoP56726 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.93■□□□□ 0.94
SmoP56726 Gm9870-201ENSMUST00000063874 645 ntBASIC20.93■□□□□ 0.94
SmoP56726 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SmoP56726 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
SmoP56726 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SmoP56726 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SmoP56726 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SmoP56726 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.92■□□□□ 0.94
SmoP56726 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.92■□□□□ 0.94
SmoP56726 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.92■□□□□ 0.94
SmoP56726 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
SmoP56726 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SmoP56726 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SmoP56726 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SmoP56726 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SmoP56726 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SmoP56726 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SmoP56726 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SmoP56726 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
SmoP56726 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.91■□□□□ 0.94
SmoP56726 Gm13241-201ENSMUST00000094493 780 ntBASIC20.91■□□□□ 0.94
SmoP56726 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SmoP56726 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SmoP56726 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SmoP56726 Gm21956-201ENSMUST00000179946 522 ntBASIC20.9■□□□□ 0.94
SmoP56726 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SmoP56726 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
SmoP56726 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SmoP56726 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SmoP56726 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SmoP56726 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SmoP56726 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.89■□□□□ 0.93
SmoP56726 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.89■□□□□ 0.93
SmoP56726 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SmoP56726 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
SmoP56726 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SmoP56726 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SmoP56726 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SmoP56726 Gm7143-201ENSMUST00000222811 859 ntBASIC20.88■□□□□ 0.93
SmoP56726 Golgb1-201ENSMUST00000023534 498 ntBASIC20.88■□□□□ 0.93
SmoP56726 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
SmoP56726 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SmoP56726 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SmoP56726 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SmoP56726 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.87■□□□□ 0.93
SmoP56726 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SmoP56726 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 218.9 ms