Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpl3P27659 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpl3P27659 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpl3P27659 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rpl3P27659 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.73■□□□□ 0.75
Rpl3P27659 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.73■□□□□ 0.75
Rpl3P27659 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpl3P27659 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpl3P27659 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpl3P27659 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpl3P27659 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpl3P27659 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpl3P27659 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpl3P27659 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpl3P27659 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Rpl3P27659 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rpl3P27659 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpl3P27659 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpl3P27659 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Rpl3P27659 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpl3P27659 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpl3P27659 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpl3P27659 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpl3P27659 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Rpl3P27659 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpl3P27659 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpl3P27659 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rpl3P27659 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.71■□□□□ 0.75
Rpl3P27659 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpl3P27659 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rpl3P27659 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpl3P27659 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpl3P27659 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.7■□□□□ 0.74
Rpl3P27659 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.7■□□□□ 0.74
Rpl3P27659 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.7■□□□□ 0.74
Rpl3P27659 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.7■□□□□ 0.74
Rpl3P27659 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpl3P27659 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpl3P27659 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpl3P27659 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpl3P27659 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpl3P27659 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpl3P27659 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rpl3P27659 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rpl3P27659 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpl3P27659 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rpl3P27659 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rpl3P27659 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpl3P27659 Gm45444-201ENSMUST00000211394 898 ntBASIC19.69■□□□□ 0.74
Rpl3P27659 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpl3P27659 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpl3P27659 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpl3P27659 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rpl3P27659 Cap2-205ENSMUST00000225824 1634 ntBASIC19.69■□□□□ 0.74
Rpl3P27659 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpl3P27659 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpl3P27659 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.68■□□□□ 0.74
Rpl3P27659 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rpl3P27659 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpl3P27659 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpl3P27659 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Rpl3P27659 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpl3P27659 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.67■□□□□ 0.74
Rpl3P27659 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpl3P27659 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rpl3P27659 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpl3P27659 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpl3P27659 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rpl3P27659 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.67■□□□□ 0.74
Rpl3P27659 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpl3P27659 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpl3P27659 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rpl3P27659 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpl3P27659 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpl3P27659 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Rpl3P27659 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.66■□□□□ 0.74
Rpl3P27659 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Rpl3P27659 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rpl3P27659 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rpl3P27659 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.65■□□□□ 0.74
Rpl3P27659 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpl3P27659 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.65■□□□□ 0.74
Rpl3P27659 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpl3P27659 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpl3P27659 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Rpl3P27659 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpl3P27659 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpl3P27659 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpl3P27659 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rpl3P27659 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpl3P27659 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.64■□□□□ 0.73
Rpl3P27659 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Rpl3P27659 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpl3P27659 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rpl3P27659 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpl3P27659 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
Rpl3P27659 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rpl3P27659 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rpl3P27659 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rpl3P27659 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms