Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.47■□□□□ 0.71
TP20293 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.47■□□□□ 0.71
TP20293 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TP20293 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TP20293 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TP20293 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TP20293 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TP20293 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TP20293 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TP20293 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TP20293 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TP20293 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TP20293 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TP20293 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TP20293 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TP20293 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TP20293 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TP20293 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TP20293 Gm10232-201ENSMUST00000089221 720 ntBASIC19.45■□□□□ 0.7
TP20293 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TP20293 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.45■□□□□ 0.7
TP20293 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.45■□□□□ 0.7
TP20293 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.44■□□□□ 0.7
TP20293 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
TP20293 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.44■□□□□ 0.7
TP20293 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TP20293 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TP20293 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TP20293 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TP20293 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TP20293 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TP20293 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.43■□□□□ 0.7
TP20293 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
TP20293 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TP20293 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.42■□□□□ 0.7
TP20293 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TP20293 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TP20293 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.42■□□□□ 0.7
TP20293 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TP20293 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TP20293 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TP20293 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TP20293 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TP20293 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TP20293 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.41■□□□□ 0.7
TP20293 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.41■□□□□ 0.7
TP20293 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TP20293 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TP20293 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TP20293 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TP20293 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TP20293 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
TP20293 Gm15546-201ENSMUST00000122095 826 ntBASIC19.4■□□□□ 0.7
TP20293 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TP20293 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TP20293 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TP20293 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TP20293 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TP20293 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TP20293 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
TP20293 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TP20293 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TP20293 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.39■□□□□ 0.69
TP20293 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
TP20293 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TP20293 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TP20293 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TP20293 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TP20293 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TP20293 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TP20293 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.39■□□□□ 0.69
TP20293 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.39■□□□□ 0.69
TP20293 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TP20293 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TP20293 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TP20293 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.38■□□□□ 0.69
TP20293 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TP20293 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.38■□□□□ 0.69
TP20293 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.38■□□□□ 0.69
TP20293 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.38■□□□□ 0.69
TP20293 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.38■□□□□ 0.69
TP20293 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TP20293 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TP20293 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TP20293 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TP20293 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TP20293 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TP20293 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TP20293 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TP20293 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TP20293 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TP20293 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.37■□□□□ 0.69
TP20293 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TP20293 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TP20293 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TP20293 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TP20293 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TP20293 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.36■□□□□ 0.69
TP20293 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TP20293 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms