Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VimP20152 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
VimP20152 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VimP20152 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VimP20152 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
VimP20152 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VimP20152 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VimP20152 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VimP20152 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
VimP20152 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VimP20152 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VimP20152 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
VimP20152 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
VimP20152 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.04■□□□□ 0.96
VimP20152 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.04■□□□□ 0.96
VimP20152 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VimP20152 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VimP20152 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VimP20152 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VimP20152 Gm9812-201ENSMUST00000061934 968 ntBASIC21.03■□□□□ 0.96
VimP20152 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
VimP20152 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
VimP20152 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VimP20152 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VimP20152 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VimP20152 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VimP20152 Gm4799-201ENSMUST00000095396 657 ntBASIC21.01■□□□□ 0.95
VimP20152 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VimP20152 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VimP20152 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VimP20152 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21■□□□□ 0.95
VimP20152 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
VimP20152 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
VimP20152 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
VimP20152 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
VimP20152 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VimP20152 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VimP20152 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VimP20152 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VimP20152 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21■□□□□ 0.95
VimP20152 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VimP20152 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.99■□□□□ 0.95
VimP20152 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
VimP20152 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.99■□□□□ 0.95
VimP20152 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.99■□□□□ 0.95
VimP20152 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VimP20152 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
VimP20152 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VimP20152 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
VimP20152 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VimP20152 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VimP20152 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VimP20152 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VimP20152 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VimP20152 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VimP20152 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.98■□□□□ 0.95
VimP20152 Terc-201ENSMUST00000082862 423 ntBASIC20.98■□□□□ 0.95
VimP20152 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VimP20152 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VimP20152 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VimP20152 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VimP20152 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VimP20152 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VimP20152 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VimP20152 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VimP20152 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
VimP20152 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
VimP20152 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VimP20152 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VimP20152 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.97■□□□□ 0.95
VimP20152 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.97■□□□□ 0.95
VimP20152 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.97■□□□□ 0.95
VimP20152 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.97■□□□□ 0.95
VimP20152 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VimP20152 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VimP20152 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
VimP20152 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VimP20152 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
VimP20152 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VimP20152 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
VimP20152 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VimP20152 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VimP20152 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VimP20152 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VimP20152 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
VimP20152 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
VimP20152 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VimP20152 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
VimP20152 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
VimP20152 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
VimP20152 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
VimP20152 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VimP20152 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
VimP20152 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.94■□□□□ 0.94
VimP20152 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
VimP20152 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VimP20152 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.94■□□□□ 0.94
VimP20152 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VimP20152 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VimP20152 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms